Ooceraea biroi (clonal raider ant): 105286789
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Entry
105286789 CDS
T05778
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obo04131
]
105286789
Membrane trafficking [BR:
obo04131
]
Protein recycling
Others
EARP complex
105286789
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
Motif
Other DBs
NCBI-GeneID:
105286789
NCBI-ProteinID:
XP_011350295
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Position
14:complement(3437663..3444843)
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AA seq
939 aa
AA seq
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MQSDIMEDLKFKFFDLINKQNTAKVPLMGLDPELLNPSELQKCEDIRSEAEQSTESELIP
DQDVLESIEDIYFTTDGNFDPSRYELEKLPILNSKQIQKCHKKLEQQSQVVSKKLLQLIL
DKQKACEVEFGKILLLQEQLQDILEICRIGRTDLKLAKTQFTTASLGILANYQKRQIVEE
LLSNLKTIKTLQRTGDRLQELLNEGNYPGAISLLLECQSAAQTYKHFHCIAALNGKLQDI
LVQAEEALDNTLSKMCTQFDVTVYSSIQEAYTLLGKTQSAMDQLHMHFTVAIHNTAFTAI
HSYAGGDMKREYKQLCQAVPREKCVACLIELCRSLWTILSSYYLVVNWHNVQNDQQPEPE
RSDVKDLEANLSKQYIKRKLENSMGRVWHDVEMKISIYLTNADLTYTKFEQFVQVLGIVN
RLMEIGEELCNFKSKDLQESIRKQSLSYFSHYHTSRLDELRIFLENDGWELCPVKSNFVA
TQLLEFRSLKPSLSNCKAWSSLDSSNLSDSDNSTGIDLQKYLEGGSSLFTIGLDDSVDED
ILINNDLDQPAYFSDESDDDIPDELKHEYVDESDHTKASKKKCKLKQSGPMVTNTTLSVL
RVCGKYLQMSKLLRSIAVTVIQSMIQFFELCFYTVHLFFTSDLQINSDSLYSPKLKLSLT
RIRENLIILENDANEESASYNKIKQPQLSSIVNLSQPEKLYGLTERIVAVESLIFLGQQY
ESLKPYLEHLIANSPQRGFLHQFYMQTIASTADLRKPVYMAVASQAFDIASILNLMNKVN
WEVTDVMSQHSNYIDALIQEVCTLSERLNTIGTYIPLNTDVCNAVWENVAHLITHTLVEG
FSSAKKCSNGGRALMQLDFTQLQSKFEKLTSLRPMPHREYVELYIKAYYLPENSFEEWIK
EHKEYSVKHLIGLISATCQNNKKTRQRLIALVEEQRSSR
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccgacattatggaggatttaaaatttaaatttttcgaccttattaacaagcag
aacacagccaaagtgccacttatgggcttggatcctgaattgcttaatccatcggagctg
cagaagtgcgaggatatccgttccgaggcggaacagtctacggagagtgagcttatacct
gaccaagatgtgttagaatccatagaagatatttatttcactaccgacggcaacttcgac
ccgtcacgttacgagctagagaaattaccgatattgaactccaagcagattcagaagtgc
cacaagaagctcgagcaacaatcccaagttgtctccaagaaactcttacagctcatcttg
gacaagcagaaagcctgcgaagtggaattcggcaagattctgctgctgcaggagcagctg
caggacattctagaaatatgtcgaataggaaggacagatctgaaactggccaagacgcag
ttcacaacagctagcttaggcatactggccaattatcagaagcggcagatagtcgaggag
ctattaagcaacctgaagactataaaaacgttgcaacgtacgggggatcgtctgcaggag
ctgctgaacgagggcaactaccctggcgccatatcactcctcctggaatgccagagtgcc
gctcagacttacaagcactttcactgcatcgccgcgctgaacggaaagctgcaagatatt
ttggtgcaggcggaggaggcgctagacaatacactttcgaaaatgtgtactcagttcgac
gtgacggtgtactcctcgatccaggaggcgtacacgttgctggggaaaacccagtctgcc
atggatcagttgcacatgcacttcaccgttgccattcacaataccgcgttcaccgccatt
cactcgtacgcgggcggcgacatgaagagggagtacaagcagctgtgtcaagccgtgccc
cgcgagaagtgcgtggcctgcctcatagagctgtgcagatccctgtggacaatactgagc
tcgtactacctagttgtaaattggcacaacgtgcaaaacgatcagcagccggaaccggag
agatctgacgttaaagatctggaggcgaatctcagcaagcagtacatcaagcgtaaatta
gagaacagtatgggccgagtgtggcacgacgtggaaatgaagatatcgatatacttgaca
aacgccgatctaacgtataccaagttcgagcagttcgttcaggtattgggtatagttaat
aggctgatggaaatcggagaggagctctgcaatttcaagtcgaaggacttgcaggagtcg
atcagaaagcagtccctgtcctacttctctcattatcacacatcccgtttggacgagctg
aggatattcctggagaacgacgggtgggagctgtgtcccgtgaagtctaattttgtcgct
actcaattattggaatttcgcagcttaaaaccgtcgctgagtaactgcaaagcgtggagc
agcctggacagctcgaacctgagcgacagcgacaactcgacggggatcgatctgcaaaag
tacttggagggtggctcgtcgctgttcacgatagggttggacgattccgtggatgaagac
atcttgataaataatgatcttgatcagcctgcgtatttctcggacgagtccgacgacgat
attcccgatgaactgaagcacgagtacgtcgacgagtccgatcacacgaaagctagtaag
aaaaaatgcaaactcaaacaatccggaccgatggtgacgaacacgacgttgagcgtactg
cgagtttgcggcaaatatctgcagatgtcgaagcttttacgatcgatcgcggtcaccgtc
atacaaagcatgatacaatttttcgagctgtgcttctacacggtacacttattctttacg
tcggatctccaaatcaacagcgattctttgtacagcccaaagttaaaattgtctttaacg
agaattcgagaaaatttgatcatcctggagaacgacgcgaacgaagaaagcgcgagctac
aataaaataaagcaaccacagctctcgtccatcgtgaatctatcgcagcccgagaagctt
tacggattaacggagcgcattgtggctgtcgagtctctgatatttttagggcaacagtat
gagagcctgaagccatacttggaacatctcattgccaacagtcctcagaggggattttta
catcagttttacatgcagacaatagcgtctactgcggatctaaggaagccagtttacatg
gctgtagcgtcgcaagcgttcgacattgcgagcattttgaatctaatgaacaaggtcaat
tgggaagtgacggatgttatgtctcagcatagtaattacatcgacgcactgatccaagaa
gtgtgtaccttgagtgaaaggctcaacactatcggaacatacattcctttaaatacggat
gtgtgtaatgcagtatgggaaaatgtagcccacttaatcacgcacactttagtggaagga
ttttccagtgctaaaaagtgttcgaacggcggtagagctctgatgcaactcgatttcacg
caactgcagtccaagtttgagaaactgacatcgttgaggcctatgccacacagggaatac
gtcgaattgtacattaaagcatactatcttcctgaaaatagctttgaggagtggattaag
gaacacaaggaatattcagttaagcacttgatcggtttaatctccgccacgtgtcaaaac
aataagaagactcgacagcgactgatagcgcttgtggaagagcaacgatctagtagatag
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