Ooceraea biroi (clonal raider ant): 105286797
Help
Entry
105286797 CDS
T05778
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105286797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
105286797
NCBI-ProteinID:
XP_011350305
LinkDB
All DBs
Position
3:complement(14422058..14433382)
Genome browser
AA seq
1778 aa
AA seq
DB search
MLRVHYGHVALIALIVIFTILTEPANSQYGPREYGSRGAVRGSHAKRPHPCEQSSCYPAT
GDLLIGRKNNLGASSTCGLRGPERFCIVSHLKERKKCFFCDASLPKQQHNIENIVSRGLW
WQAENGMENVTIRFDLEAEFHFTHIIIRFQTFRPAAMLIERSYDFGKSWQVYRYFAHNCE
AFFPGIPTHQPQRLTDVICESRYSAVAPSTGGDVIFRVLPRNLDIDNPYSKEVQNLLKIT
NLRINMTRLHTLGDDLLDDRAEIREKYYYAIQDMVIRGSCSCYGHASRCLPLPGVVDEEN
MVHGRCECTHNTKGLNCETCEDFYNDLPWKPAVGKQTNACRPCNCNNHTTSCHFDEGVYE
RSGRVSGGVCDDCQHNTRGQNCEQCKPFYYHDLTRDISDPEACQPCDCDLSGSLDDGICD
SKTDLLSGDESGRCHCKANIEGRRCDRCKNGFWNFEPNNPEGCQACTCNTLGTVDNQGCN
MLTGECTCKRYVTARDCNQCLPEYWGLSEDRDGCKPCDCDPGGSYENSCDVVTGQCRCRP
HVSGRTCNQPEQSYYTGSLDFLIYEGELSRATDNCQVVIREPYRDGRNSTWTGTGFMKAL
EGSVLNFTIDDIRRSMWYDVIIRYEPVHPGVWDDVQIILERDSPPDPNGPCVDWRPDHDR
LWAQLPLRSRSAVAQPSLCLEAGKRYNLLLQFRKFNGHVDIPSASILVDSIVLKPRIDVI
PFFKMPGLGELRRQEYERYRCEEFFNDVNSVWSNIPEICKKYQNSIGYYVFDGAHSCECN
PTGSRSLLCENYGGMCPCKPNVVGRRCDRCAPGTYGFGPEGCIPCDCDGVGALDNFCDVE
TGRCKCRPNTYGRTCGQCEPGFWNFPHCQRCECHGHADSCDSKTGACINCRDFTTGHNCD
RCVDDFYGDPRIGVDIPCRACPCPGTRESGHSYADGCSLDSLTQDVVCECFEGYAGPRCE
HCAENYFGDPEVPGGSCQLCDCSNNTDLRRAGNCDPHTGHCLQCLYNTDGRNCEVCKAGF
YGDAFRKDCRDCGCNVLGTDKSAGPCDHRTGQCPCLPHVIGQLCDSCEENHWRIASGQGC
DPCECDAVGSVSDRCNPYDGTCECRPGFGGRRCNECQTNFWGNPNVECYPCECDVIGSAS
QQCDRETGVCICHKGIGGEKCDQCDRGYHGEAPQCSPCGECFDNWDLILDGLKNKTHAVI
QEASRIQKVGTTGVYSQEFDDMEESLNEVRDLISNTTIRSQDLDTLDVLADELAKNITES
AQQLEEANNQLENLSQRVNLGDVALKKLKDRTESLHEAADKLRENATRLQEENVQGALNV
TQQMAEQSRQAEKMANDTSSVLADAERFRKHTENLLAKNRASVDEAQERNKESLMKLNEK
LTAFGMNMPELNLQMCGDNVTDCSTVCGGAGCGFCGGLSCDAGAVTKANQALDVAKQQAA
KIKNQKDEAEQLLRNMSQIKQDSTAARSNAQDAFNYAWDARNRSDKITKDLSDITKRIWH
TLDEEQATPAMVRDLANEVLEKNIQLEPDEITRLADHIKSIVGSLTDSEKILADTKDDLQ
LAHDLEMRAKQAKEIAIEEQNLASKVILLLNDTQTAQRLAQSAIDKAEADVSRSQDDLAD
IAEVTKAAQIQANTTTQSVEALDARLKQLQTQSVRNDFVLTKEIGVEAKKVADEARAIDG
KTKKLSEEYKRADESLNQRVNKSKGDIQRAKMLLQRASELTADTSTKFKDLDGMESVYRE
NERVLTDLMSDVDALTLEMERHLAEIERKSHSYRHCSP
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtgttcattatgggcacgtggccctcatagctttaattgttatatttactatt
ttaacagaacctgcgaattctcaatatggaccaagagaatacggatcaagaggagcagtc
agaggatcacacgcgaaaagaccacatccctgcgaacaaagctcgtgttatcctgcaact
ggagatttactgattggtcgcaagaataatttgggtgcttcgtcgacatgcggtctcagg
ggtccggaaagattctgcatcgtttcccaccttaaggaaaggaagaaatgcttcttctgc
gacgcgtcactacccaagcaacaacacaacatcgagaatatcgtcagtcgtggattgtgg
tggcaagctgagaatgggatggagaatgttacgatacgctttgatctcgaggcggagttt
cactttacgcacatcattattcgcttccaaaccttccggccggctgccatgctgatcgag
cgatcgtacgatttcggcaagagctggcaagtgtaccggtacttcgctcacaattgtgag
gcgttcttccccggtattcctacccatcaaccccaaagattaacggacgtcatttgcgaa
tcgagatattcagctgtagcgccgtccactggcggtgacgtaatcttcagagtgttaccg
cgaaatttggacattgacaatccctattcgaaggaggtacagaatctcctgaagatcacc
aatctcaggatcaacatgacgaggcttcataccttgggcgatgatttgcttgacgaccgg
gccgagattcgcgaaaaatactattacgctatccaggatatggtgattcgcgggtcctgc
tcgtgctacgggcatgcttccaggtgtttgccgttacccggagtcgtcgatgaggagaac
atggtccatggtagatgcgagtgtactcacaacactaaaggtctcaattgcgagacgtgc
gaagatttctacaacgatctgccgtggaaacctgcggtcggcaaacagacgaacgcctgt
aggccttgcaattgcaacaatcataccacctcctgccatttcgatgaaggagtctacgag
aggtcggggcgagtgtccggcggagtctgcgacgattgtcagcacaatacgcgaggacag
aattgtgaacagtgcaagccattctattatcacgacctaacgagggatatttctgatccg
gaagcttgccaaccttgcgactgcgatttgagtggctctttggacgacggcatatgcgat
tcgaaaaccgatcttctcagcggcgacgagtccggacgctgtcactgcaaagcaaacatt
gagggacgtcgttgcgatcgctgcaagaacggcttctggaatttcgagcctaataatcct
gagggatgtcaagcctgtacctgcaacactctcggcaccgtcgacaaccaaggctgcaac
atgttgaccggcgagtgcacgtgcaaacgttacgtcactgcacgcgactgcaatcagtgt
ctgccggaatattggggactctccgaggaccgtgacgggtgtaagccctgcgactgcgat
cccggtggctcctatgagaattcctgcgacgtcgtcaccggccaatgtcgatgcaggccg
cacgtcagcggaagaacgtgcaaccaaccggagcaaagttattacaccggctcgctagat
ttcctcatttacgaaggagagttatctagagccaccgataattgtcaagtggtaatcagg
gaaccttatcgcgatggcagaaacagcacgtggaccggcacgggtttcatgaaggctctt
gagggctcggtactgaacttcactatcgacgatatccgcagatccatgtggtacgacgta
atcatacggtacgagccggtgcacccgggtgtctgggacgatgtgcaaatcattctcgag
agggacagtccgccagatcctaacggtccgtgcgtcgactggagacccgatcacgatcgt
ttgtgggcccagttgccgttgcgttcgaggagcgccgtggcccagccgtccctatgcctg
gaggcgggaaagcgatataatctattattgcagttccgcaaatttaacggccacgtggac
ataccttcggcctccattttagtcgactcgattgttctgaagccaaggatagacgtgata
cccttcttcaagatgccagggctgggtgaactgcgtcgtcaggaatacgaacgctatcgt
tgcgaggaattcttcaacgacgtcaacagcgtatggagtaacattcctgagatctgcaaa
aaatatcagaacagtattggctattacgttttcgacggtgctcattcctgcgaatgtaat
cccacgggttcgcgcagtcttttgtgtgagaattacggcgggatgtgtccgtgtaagcca
aatgtggtgggcagacgttgcgaccgttgcgcgccgggcacgtacggatttggtcccgag
ggatgcatcccctgcgactgcgatggcgttggtgctctcgataacttctgcgacgtcgag
accggccgctgcaagtgccgtcccaatacttacggtagaacctgcggtcagtgcgagccc
ggtttctggaacttcccgcactgccagcgatgcgagtgccacggacacgcagacagctgc
gattcgaaaactggagcctgcattaattgccgagacttcactaccggtcacaactgcgac
cgttgcgtcgacgacttctatggcgatccacggattggcgtggacataccttgtagagcg
tgtccttgtccaggtactcgcgaatccggtcactcctacgccgacggctgctcgctagac
tcgttaacgcaggatgtggtgtgcgagtgtttcgagggatacgctgggccgcgatgcgag
cactgcgccgaaaattactttggcgatccggaagtacctggcggtagctgccagctctgt
gactgcagtaataacacggatttacgccgagctgggaactgcgatcctcacactggtcac
tgtctgcagtgtctgtacaacaccgacggtcgcaattgcgaagtttgcaaagcgggattc
tacggagacgccttccggaaggactgccgggactgcggatgcaacgttctcggcaccgat
aaatccgcgggaccctgcgatcatcgtactggacaatgtccgtgtctgccgcacgtcata
ggacagctctgcgattcctgcgaggagaatcattggaggatagccagtggacagggctgc
gacccgtgcgagtgcgatgcggttggaagtgtttcagacagatgcaatccctatgacggc
acttgcgagtgcaggccagggttcggcggcagacggtgcaacgagtgccagacgaatttc
tggggtaacccgaacgtggagtgctatccgtgcgagtgcgacgtgatcggttctgcgagc
cagcagtgcgaccgcgagaccggagtgtgcatttgccacaagggtatcggtggcgagaag
tgcgaccagtgcgatcgcggctatcacggcgaggcaccgcaatgcagcccgtgcggcgag
tgcttcgacaattgggatctaatactggacggtctcaagaacaaaacgcacgccgtgatc
caagaagcctcgaggatacagaaggtcggtacgacaggcgtgtacagccaagaattcgac
gacatggaagagtcgttgaacgaggtgcgggacctgatcagcaacaccaccattagaagt
caagatctggacacgttggacgttctggctgatgaactggcgaagaatatcaccgaatcg
gcgcagcagctggaggaagcgaacaatcagttggagaatctcagtcagcgagtgaatctc
ggggatgtcgcgctgaagaaactcaaggatagaacggaaagcttgcacgaagccgccgac
aagctgcgggagaatgctaccagattgcaagaggagaacgtgcagggtgctctgaacgtg
acgcaacaaatggccgagcagtctaggcaggccgaaaaaatggcgaacgataccagtagc
gttctggcggacgcggaacgattccgcaagcatacggaaaatctcctggcgaagaatcgc
gcctccgtggacgaggctcaagagaggaacaaggaatcattaatgaagttgaacgagaag
ctgacggcgtttggtatgaacatgcccgagttgaatctgcagatgtgcggggacaacgtg
acggattgcagcaccgtctgcggtggtgcgggctgcggcttctgcggaggtttgtcttgc
gatgccggtgcggtgaccaaagccaatcaggcgctagacgttgccaagcaacaagccgct
aaaattaagaaccaaaaggatgaagccgagcaattgctgcgtaatatgagccagatcaaa
caagactcgacggcggcaagatccaacgcccaagatgctttcaattatgcgtgggacgcg
cgcaatcgctccgacaagattaccaaggacctctcggacataactaagcgcatctggcat
actctggacgaggaacaggcgacaccggccatggtgagggacctcgcgaacgaggtgctc
gagaagaacatccagctggaaccggatgaaattacgcggttagctgaccatatcaagagc
atcgtgggctcactcaccgattccgagaagatcctcgccgataccaaggacgatcttcaa
ctggctcacgatctcgagatgcgtgcgaaacaagccaaagagatagctatcgaggagcag
aatctggcgagtaaagtgatcctgctgttaaacgacacgcagacggctcaacgtctagcg
cagagcgcgatcgacaaggcagaggccgacgtgtcgaggtcgcaggatgacctggcggac
atcgccgaagtgacgaaagccgctcagattcaggcaaacaccactactcaatcggtggag
gcgttggacgcccgtctgaagcagcttcagacgcaatccgtaagaaacgactttgtcctg
acgaaggaaatcggcgtggaggcgaagaaggtcgccgacgaggcgcgggcaatcgacggc
aagacgaagaaactgtcggaggagtacaagagggcggacgagtcgctaaaccaacgggtg
aacaagagcaagggtgacatacagcgagcgaagatgcttttgcagcgggcatccgagctg
acggccgacacgtcgaccaagttcaaggatctggacggtatggagagtgtctacagggag
aacgagcgggtattgacggatctaatgagcgacgtggatgcgctgacgctcgagatggaa
agacacctcgcggagatcgagcggaagtcgcactcgtacaggcattgctccccctaa
DBGET
integrated database retrieval system
