Ooceraea biroi (clonal raider ant): 105286822
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Entry
105286822 CDS
T05778
Name
(RefSeq) uncharacterized protein LOC105286822 isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105286822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obo03400
]
105286822
Enzymes [BR:
obo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
105286822
DNA repair and recombination proteins [BR:
obo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
105286822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
HTH_48
HTH_50
Motif
Other DBs
NCBI-GeneID:
105286822
NCBI-ProteinID:
XP_011350350
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Position
7:14228028..14231565
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AA seq
458 aa
AA seq
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MLLKHVNRFVFVLDEGAVFHNTCKYWFRRFKDRDFIVSNRPLCGTPRKVVADNLKALFIE
NLSQTQGELTEQLGVYRTTIFRRLHRVGEPRKLGNYVPHKLLQNNCNMPPKRTPKAKANS
SKATSDKKTEVLNKASKKKREINSNDEPASKKAKIESKETKHESSPSAMNKSKNEPKQML
NKTDTNLNEIEFACTKTNEEGKKYNLKICTWNISGIRAIVKKNGMEYIAKEDADIVALQE
TKCDKDKIPEEVKLPGYHNYFLDSKKPGYCGVALFCKEKPVTIKYGLNNASFDSEGRIIT
AEFSEFFLVNVYVPNAGQKLVTLPKRLEWNKTFKKYIEKLDEKKPVIICGDMNVAHQEID
LKNPKTNTKNAGFTKEERDDMTDFLTAGFVDSFRLLYPDKEGAYTFWSYFASARNKDIGW
RLDYFLISDRIKSKVCDNVIRKQVYGSDHCPVILYINL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgctgctaaagcatgtgaatcgatttgtttttgttcttgacgaaggtgctgtatttcat
aatacgtgcaaatattggtttcgtcgttttaaagaccgtgattttatcgtaagcaaccga
ccactctgtggaacgccacgaaaagtggtggccgataatctgaaagcattattcattgaa
aatctatcgcaaacgcaaggagaacttacggaacaactaggagtgtatcgaacaacaatt
ttcagacgactgcatagagtgggggaacctcggaagcttgggaactacgtaccgcacaaa
ctcttgcaaaacaattgcaatatgccaccaaaaaggactccaaaagcaaaggctaattct
tctaaagctacgtctgataagaaaacagaagtactaaacaaagcttcaaaaaagaaacgt
gaaattaattcaaatgatgaacctgcgtcaaagaaggcaaagattgaatcaaaagaaaca
aaacatgagagttctccatccgcgatgaacaagtcaaagaatgaaccaaaacaaatgctg
aataagacagatacgaatttaaatgagatagagtttgcatgtacaaagacgaatgaagag
ggaaagaaatacaatctgaagatttgtacttggaatatttctggaattcgagctatagtt
aaaaaaaatggaatggagtatattgctaaagaagatgcagatatagttgctttacaagaa
acaaaatgtgataaagataagatcccagaggaagtaaaattgccaggatatcataattat
tttcttgacagtaaaaaaccaggttattgcggagttgctttgttctgtaaagagaaacca
gttacaataaaatatggtttaaacaatgctagtttcgatagcgaaggtagaataatcacg
gcggaattctcagaatttttcttggtcaatgtttatgtgccaaatgctggtcagaagtta
gtaacgctaccaaaaagattagaatggaataagacatttaaaaagtatatcgagaaattg
gatgaaaagaaacctgttattatttgtggtgatatgaatgtagctcatcaagaaatagat
ttaaagaatccaaaaacaaatactaagaatgctggatttaccaaagaagagcgagatgat
atgacagactttttaactgctgggtttgtggattcttttcggttgttgtatcccgacaag
gaaggtgcatatactttctggtcatactttgctagtgcacgcaacaaggatattggatgg
cgattggactatttcttgatatcagatcgaataaaaagcaaagtatgtgataatgttata
aggaagcaagtttatggcagtgatcattgtcctgtaatactttacatcaatctataa
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