Ooceraea biroi (clonal raider ant): 105286999
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Entry
105286999 CDS
T05778
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03022
Basal transcription factors
obo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105286999
09124 Replication and repair
03420 Nucleotide excision repair
105286999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obo03021
]
105286999
03400 DNA repair and recombination proteins [BR:
obo03400
]
105286999
Transcription machinery [BR:
obo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105286999
DNA repair and recombination proteins [BR:
obo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105286999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-UDP
zf-C3HC4
zf-RING_2
zf-P11
zf-C3HC4_2
zf-RING_4
TRAF3_RING
zf-RING_6
DUF2828
Motif
Other DBs
NCBI-GeneID:
105286999
NCBI-ProteinID:
XP_011350662
LinkDB
All DBs
Position
5:9058480..9060620
Genome browser
AA seq
321 aa
AA seq
DB search
MDDQACPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFLKGSGSCPECKIPLRRTNFRV
QMFEDSMVEKEINIRKRILRDFNKKEDDFPTLREYNNYLEDIETIIYNLANNIDVIETNK
KIEQYKKDNKEQIAKSKSKLGRSEHELEEMIELEKQKEEERRVELAKEEVEAKRKRIREK
EALIDELTFSDASAKNIVESFASAIQTQKKEAKANSAIKATQFSTGIKFGNQGNQNYISV
PKVEEGPLYSYTPIRQQIEGPSPPGWRELQARGYVSHIRSESQVERAGGFKAHVACLRAL
QEAMAGLYHNPSQRQAEFATV
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcaagcgtgtccacgatgcaagaccaccaaataccgaaatccatccttgaaa
ttgatggtaaacgtttgcggccatacattatgcgagagctgcgtggatttactctttttg
aaaggttctggatcctgtccggaatgcaagataccattgagaagaacaaatttccgagtt
cagatgtttgaggattccatggtcgaaaaggaaataaatataaggaaacgtattctgcga
gatttcaataaaaaggaagacgactttcctacgttgagagaatacaacaattacttggag
gacattgagactataatatacaatttggcaaataacattgatgttatcgagacaaataag
aaaatagaacagtataagaaggacaacaaggaacaaatagcaaagagtaagtcgaaactt
ggtaggagcgagcacgaattggaggagatgatagaattagaaaaacaaaaggaggaggag
aggagggtagaacttgcgaaggaggaggtggaagcgaagagaaagaggattcgcgagaag
gaggctctgatagacgagctgacattttccgatgcgagtgccaaaaatattgtcgagtcg
ttcgcctctgcgatccagacgcagaagaaggaagcgaaggctaattccgcgatcaaagct
actcagtttagcacgggaattaagtttggcaatcaaggaaatcaaaattacatatcagtg
ccgaaggtagaggagggtcctctgtattcgtacacgcctatccgacagcagatagaaggc
ccgtcaccacctggttggcgagagcttcaggctcgcggatacgtttcgcacatacgtagt
gaatctcaggtcgagagagcaggaggatttaaagcgcatgtcgcgtgtctgcgcgcactg
caggaagctatggccggtttgtatcacaacccttcgcagcgacaggcagaatttgcgact
gtatga
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