Ooceraea biroi (clonal raider ant): 105287182
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Entry
105287182 CDS
T05778
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105287182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105287182
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105287182
mRNA cycle factors
Common to processing body (P body) and stress granule
105287182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_8
Motif
Other DBs
NCBI-GeneID:
105287182
NCBI-ProteinID:
XP_011350975
LinkDB
All DBs
Position
6:complement(10819231..10825323)
Genome browser
AA seq
1163 aa
AA seq
DB search
MGLKAAVQALKKAEPLKDKVQRCKDLLNDNDAWVCQQQLQKIYQQVLILDLEYALDRKVE
QELWNLGFKNYIATLQVQAKDRKNPKRSESQALLSWCLEAASGFYLTLLQEICTVFDLDL
PFRRKGYIYGCTSPWKAVEKLSPPHKSSCFYACQYCLVHLGDIARYRNESKQAEMFYRHA
VSLSPSSGQPYNQLALLEASRGDKLGTVFHYARSVAVKHPFPAAASNLAMILSTALNDKS
FNIDGKTKLSSQEYVVVFLKLHGIIHNIGDLKLACSYSKLLTETLTALVATESFSSWMLI
QMLVINLYVLQHTVGTVGSVDGVELLRNEQLSNDEKLARDCILDLIAGTLSALLLPVYTI
KNSIIEYFALPSIKLCLDWINMKPMVLEEVAFTSRLQIWPSLCVLLNALQNCVVDFKYDD
YATVPLPEDRDLQGFLPLEKSFENLKFTNSPVLEGDVATLNKLRAVRILRLGRCLAQYQI
NGSAPISITTEEKTGDSRFTSMSNGAGPSNELMKELEELSLNKDKQPLNTSVSPVLSEAA
SSKSSVETDVEISVDRKIFQSILKPQGSLERNRESLASTAETSGVETNSLPCARKPRQNI
AMQAIMRRAESEQKQVTFKNVSPVMVEDENDRKAKAAAVVAPPGNAPAANKSMPIPEISK
ANDVASATNVNVSNRLSTLTLASPGSQHQPASVQSQQRLAKLPPGVSMLAQANQLAAKEQ
QTQQIAQQMLPQMHPAMVAQCGQQAPALGPLCYPPSQSFNMQNPQFAKNFVVNRPSPVSA
PRYQMQGQLNNCQQPVSTISSQAMSGVHHGVANPSRPLHQRISQSVSHNPAQLLQQSMMP
QSMNLQANNMVLQSGMNVDQQNHAISLQQQQNIIQSNPRPNQAATQSQLSMNGSSLANMS
AIMSTLSTMYEKNPQQPTLTTLPGSSSPTGASNFQLGFNQAQAFSQPTLPQSQSFFKKDS
DAMDFAFPSQAGVSKTQPQPQMNNYNMFCNYEPTEHFNLWKDNRSTAQQPSTAWWSSASN
ATAQMQPKASTVNDSAFSNWSDSINVGNMTSNRMMLTPGKNYQQQQQNGQHGRPVVGNTF
ESSRLFEQLEQKTSSQPVSTGNTYSLFSGNTWSTVNTPVNSSSTSQDQMKARLHQQSLWS
GPGPSPLERLLEQQKSLREGGTT
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgggcctaaaggcggctgtccaggctttaaaaaaagcggaaccgttgaaggacaaggtc
cagcgctgcaaggatctgctgaacgacaatgatgcttgggtatgccagcagcaactgcag
aagatatatcagcaggtcctcatactggatctggagtatgccctggatagaaaggtcgag
caggagctgtggaacctgggatttaagaattatatagcgacgctgcaggtgcaggctaag
gataggaagaatcctaagcgcagcgagtcccaagcgttactgagctggtgtttagaagcg
gctagtggattctacttgaccttgttgcaggagatttgcacagtttttgatttggattta
ccgttcagaaggaaaggttacatttatggttgtacgtccccctggaaggccgttgagaaa
ttgtctccgcctcacaagtcgtcctgtttctacgcctgccaatactgccttgtacatctg
ggcgacatcgcgcgatacagaaatgagagcaagcaagccgagatgttttatcgacacgcc
gtctcgctctcaccatccagcggacagccgtacaaccagttagcgctactcgaggcatct
cgcggcgacaagttgggcacggtgttccattacgctcgttccgtagctgtgaaacacccc
ttcccggcagccgcgtccaacctggccatgattctgtccaccgcactcaacgacaagtcc
ttcaacatcgacggcaagacgaaactgagctctcaggaatacgtcgtcgttttcctgaaa
ctccacgggataattcacaatatcggcgacttgaagctcgcgtgctcgtacagcaaactg
ctgacggaaacgctgaccgcgctggtcgctaccgagagcttcagctcgtggatgctgata
cagatgctggtgatcaacctgtacgtgctgcagcacacggtcggcaccgtcggaagcgtc
gacggcgtggaactgctgaggaacgagcagctgagcaacgacgagaagctcgctcgcgac
tgcatactggacctaattgcgggcaccctgtctgctttattgttgcctgtttacacgata
aaaaactccattatcgagtactttgcgttgccttctataaaactgtgccttgattggatc
aacatgaagcccatggttttggaggaagttgcttttacgtcgagattacagatctggccc
agcctctgcgttctgctgaacgccctgcagaattgcgtggtcgacttcaaatatgatgac
tacgcgacggtgccgttgccagaggaccgcgatctacaaggtttcttaccgctggagaag
agttttgagaacctcaagttcacgaacagcccggtcttggaaggcgacgtcgcgacgttg
aacaagctgcgcgccgtgcgcattctgcgcctgggtcgttgtctcgctcaatatcagatc
aacggatcagcgccaatttcgatcacgacggaggagaaaaccggcgacagcagatttacg
tccatgagcaacggcgccgggccaagcaacgaattgatgaaggagctcgaagaacttagc
ctgaataaagataagcaaccgttgaacacttcagtgagcccagtgctgtctgaagcggcc
agcagcaagagttctgtggaaactgatgtcgaaatttctgtagaccgaaagattttccag
agcattctcaaaccacaaggctccttagaacgaaatcgcgaatccctagcgagcaccgct
gagaccagcggcgtcgagacgaattctttgccgtgtgcgagaaagccacggcagaacata
gcgatgcaggcaattatgcgtcgcgcggagagcgagcagaaacaggtgacgtttaaaaac
gtctccccagtgatggtcgaggacgagaacgataggaaagcgaaagcagccgcagtcgtc
gctccaccgggcaacgctcccgccgcgaataagtcgatgccaatcccagagatatccaaa
gctaacgatgtcgccagtgcgactaacgttaacgtatcgaatcgcttatcgacgctgacg
ctcgcttcgcccggcagtcagcatcaacccgcgtcggtccagagccagcagagactcgcg
aagctgccgcccggcgtctccatgctcgcgcaggcgaatcagctggctgcgaaggaacaa
cagactcaacaaatcgcccagcagatgctgccacagatgcaccccgccatggtggcgcag
tgcggtcaacaagctccggcgctgggtccgctctgctatcccccgagtcagtccttcaac
atgcagaatccgcagttcgccaagaacttcgtggtgaaccggccgtcgccggtgagcgca
ccgcgctaccagatgcaggggcagctgaacaactgccagcagccggtctcgacgatctcg
tcgcaggccatgagcggagtacatcacggagtggcgaacccgagtagaccgctgcaccag
aggatctcgcagagcgtgtctcacaatcccgcgcagttgctgcagcagagcatgatgccg
caaagcatgaacttgcaggcgaataatatggtactgcagtcgggtatgaacgtggaccag
cagaaccatgcaattagtctgcagcagcagcaaaacataatacagagcaatcccaggccg
aaccaggcagctacgcagagtcagctgagcatgaacggatcgagcttggcgaacatgtcg
gcgataatgtcgacgttgtcgacgatgtacgagaagaaccctcagcaaccgactctgacg
acgctgccaggctcgtccagtccaacgggtgcgtcgaatttccagctcggcttcaatcag
gcccaagcgttcagccagccaacgctgccgcaatctcagtcgttcttcaagaaggattcc
gacgcgatggacttcgcgttcccaagtcaggccggtgtaagcaagactcagccgcagccg
cagatgaataattacaacatgttctgcaactacgaaccgaccgagcacttcaatctgtgg
aaggacaatcgatcgaccgcccaacaaccgtcgactgcttggtggagctcggccagtaac
gctacagctcaaatgcaaccgaaagcttcaacggttaatgatagcgcgttctcgaactgg
agcgattcgatcaacgttgggaacatgacgagcaacaggatgatgctgacccccggcaag
aattatcagcaacagcagcagaacgggcagcacggcagacctgtcgtgggaaatactttc
gagagttccagattgtttgaacagctcgagcagaaaacgtcctctcaacctgtgagcacc
ggaaacacttactccttgttcagcggtaacacgtggagcaccgttaacacgcccgttaat
tcgagctcgactagtcaggatcagatgaaggcgagacttcatcagcagtctttgtggtcc
ggcccaggcccgtcgccattggagcggctcctggagcagcagaagtcgctgcgcgagggt
ggtaccacttga
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