Ooceraea biroi (clonal raider ant): 105287272
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Entry
105287272 CDS
T05778
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04145
Phagosome
obo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105287272
09142 Cell motility
04814 Motor proteins
105287272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obo03036
]
105287272
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
obo04812
]
105287272
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
105287272
Cytoskeleton proteins [BR:
obo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
105287272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Dynein_IC2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_HPS5
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
105287272
NCBI-ProteinID:
XP_011351097
LinkDB
All DBs
Position
14:2855287..2866712
Genome browser
AA seq
723 aa
AA seq
DB search
MMSDRKAELERKKAKLQAIREEKERRRREKEQKDVEEATVRAAGTDKDQRKELDAMLSSL
GVAPVSDVLSSLSSMSSLTPEQSANATPDASLQPSSINSAQSAGRRRNRELTVVSVAHTN
IPPKEPVVYSKQTQTIQTTHTSHDGLSTSSSAYTIYSSCSTTTPTHSCSAGYFETDWWRP
RKGGSAPNYLSHAFDYYDEYNLNPGLEWEDEFTVLTFDDGQAEDEENSLPHMDGFQSKLP
PGILPHGLPQVKEVQPAVTQVEQEKEKEKPKKEVRELSEEEKQMIILSEDFQRFLDRTSR
IVERALGESVDIYTDYTGTMDGEDGMDEKSHQRLWLNRSFICERWSRNRCVTSMDWSPQF
PELLAASYNNNDDTPNDPDGVCLIWNTKFKKTTPEFIFHCQSPVMSTTFARFHPNLILGG
TYSGQIVLWDNRVQKRTPIQRTPLSATAHTHPVYCLSVVGTQNAHNLISISTDGKLCSWS
LDMLSQPQEALELHTKQSKAIAATCLAFPYGDVNNFVMGSEDGTVYSACRHGSRAGLTET
YEGHQGPVTGISAQAVQGGIDFSHLFLTSSLDWTIKLWSLKENKPLYSFEHNGDYVYDVA
WSPTHPALFASVDDSGRLDLWNLNQDTEVPTASVIIDGCPALNRVSWTPSGLHVTVGDDT
GKIWVYDVAEHLAHPRIDEWNKFLYTQQDLKNNKADEELDKLNLSSGPSSLTSMTSISSV
PLR
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccgatcggaaagctgagttggagaggaagaaggcgaagctgcaagccatcaga
gaggagaaagaaaggcgcaggcgggaaaaggaacagaaagatgtggaagaagcgaccgtc
cgtgctgctggtacggacaaggatcagcgcaaggagctagatgcgatgctctcctccttg
ggtgtagctccagtgtcagacgtactgtccagtttatccagcatgagttcgttgacgcca
gaacagagtgccaacgctacgccggacgccagtttgcaaccgtctagtataaattctgct
cagagcgcaggacgcaggaggaaccgggagctcactgtcgtgtccgtggcccacacgaac
attcctccgaaggaaccggtcgtctacagcaagcagacgcagaccatccagacgacgcac
acgtcccacgacggactgtccacatcgtcctctgcatacaccatctactcctcctgttca
acaacaacaccaactcactcttgctccgcaggctactttgagactgactggtggcgtccc
aggaaaggtgggtctgcaccaaactacctatctcatgcattcgactattacgacgagtat
aatctgaaccctggtttagaatgggaggacgaatttacagttttgacatttgatgatggc
caagccgaagacgaagaaaatagcttgccgcacatggacggtttccaaagtaagcttcca
ccgggaatcctgcctcacgggttaccgcaagttaaggaagttcagcctgccgttacacag
gtagaacaggagaaagaaaaggagaagcccaagaaggaagtgcgagaacttagcgaggaa
gagaagcagatgattatcctgtcggaagactttcaacgattccttgatcgtaccagcaga
attgtcgagagagcgttaggcgagtcggttgacatttataccgattacactggtaccatg
gacggcgaagacggaatggacgagaagagtcaccaacgtctctggttaaatcgctcgttc
atctgcgaacgatggtctcgtaatcgttgcgtcacctccatggactggtcgccgcagttt
cccgagcttttagcagcctcgtacaataacaacgacgataccccgaacgatcccgacggc
gtgtgcctaatctggaacacgaaattcaagaaaacaacccccgagtttatctttcactgt
cagtcgcccgttatgtccaccacgttcgcccggtttcacccgaatttgatcctgggcggc
acttactccggtcagattgtgctttgggacaaccgagtgcagaagagaactcccatacaa
cgtactcctttgtccgctaccgcgcatactcatcctgtgtattgcctgagcgtcgttggc
acgcaaaatgcgcacaacctgatcagtatctcgacggatggcaagttgtgctcgtggagt
ctagacatgctgtcgcaaccgcaagaggcattggaattgcacacgaagcaatcgaaagcg
atcgccgccacgtgcttggctttcccgtatggcgatgttaacaatttcgttatgggcagc
gaggacgggactgtatactcggcttgtcgacacggcagccgcgctggcttaacggaaacg
tacgagggtcatcaaggaccagtgaccggcattagtgcacaggcggtgcaaggcggaata
gacttctcccacctattcctcacgtcttccctcgactggaccatcaagctgtggagtcta
aaagaaaacaagccactctattccttcgagcacaacggcgactacgtctacgatgtcgct
tggtcgccaacgcatccggcactgtttgcgtctgtcgacgattcgggcaggctggacttg
tggaatttgaaccaagacacggaagtgcctaccgccagcgtcatcatcgacggatgtccg
gctctgaatagagtatcgtggacaccgagcggattgcacgtcaccgtcggcgatgatacc
ggtaaaatatgggtctacgacgttgctgagcacctagctcacccaagaatcgatgagtgg
aacaagttcttgtacacgcaacaagatctaaagaacaacaaggcagatgaagagttggac
aaacttaatctcagttccggaccgtcttcgttgacatctatgacatcgatttcatcggta
cctctgagataa
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integrated database retrieval system
