Ooceraea biroi (clonal raider ant): 105287295
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Entry
105287295 CDS
T05778
Name
(RefSeq) cohesin subunit SA-2
KO
K06671
cohesin complex subunit SA-1/2
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obo03036
]
105287295
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
105287295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
DUF7004
Motif
Other DBs
NCBI-GeneID:
105287295
NCBI-ProteinID:
XP_011351161
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Position
5:6106275..6114624
Genome browser
AA seq
1289 aa
AA seq
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MMHRRGGKRIRMDDPVPPEYETPMTPMTPMTPMTPMNDNSGGDANDSYNTYAPYNPASQT
PLQNPTPEHYSSESYSSPGTSQQQQYQEQSGNFDNPAQFEAPMTPATPNMRITRNTRARM
RGGVVQQPKYKEVDTDYAPSSSGSGRGRGSGGRGRGKRTHHSHSLEDEASLYYVIRNNRS
SLTTIVDDWIEKYKSNRDNALLMLMQFFINASGCKGRITPEMQQTMEHVAIIRKMTEEFD
EESGEYPLIMTGQQWKKFRANFCEFVQILVRQCQYSIIYDQFLMDNVISLLTGLSDSQVR
AFRHTATLAAMKLMTALVDVALTVSINLDNTQRQYEAERQKAREKRAADRLESLMAKRKE
LEENMDEIKNMLTYMFKSVFVHRYRDTLPEIRAICMAEIGVWMKKFHQNFLDDSYLKYIG
WTLHDKVGEVRLKCLQALQPLYASEELKTKLELFTSKFKDRIVAMTLDKEYDVAVQAVKL
VISILKHHREILTDKDCEHVYELVYSSHRAVAQAAGEFLNERLFRPDDEAVAGIKTRRGK
KRLPNTPLIRDLVLFFIESELHEHGAYLVDSLIETNQMMKDWECMTDLLLEEAGPDEEAL
DNQKETSLIELMVCCIKQAATGEAPVGRGPTRKILSVKELKQVHDDKQRLTEHFIQALPL
LLDKYRADPEKLANLLAIPQYFDLDIYTKSRQEINLDSLLSKLHGIVEKMHDTEVLDTAA
KTLEHMCVEGHAIFTRCDVARSTLIDSIVNKYKEAIDEYRNLIEGDEEPDEDEIFNVVQS
LKKVAIFYSCHNMNPWGIWDSLYKDIEDAKDPSKCLPYEAVKYCISACFFAILWGQNHLM
EAVDFGTRGEEECRQLKERLHSFMGSMRHFVSSDSSGAPSPPILREEAYNTICDLLVVFC
SQLSTHANPLMHQLVYEPDQAMQNMLNRFIQEYVFFEEEDDEHDEHSKIEELHKRRNFLA
GYCKLIVYNMIPTKAAADVFKHYVKYYNDYGDIIKTTLGKARDINKTNCALTMQQSLNIL
YNEIVAEKGKVNRNSEEFTAIKELAKRFALSFGLDAVKNREAITALHRAGVLFAITPPDG
IEQDPTGPPPNLPFLEILLEFTNKLLKQDKRVVLNFLDRRLQAGMPSSRGEDWQPLLLYR
NSLLHGETDQVPVTSKRAYTRRKKDHLAEEEEADEPDEGSDHEFAGKHKKKRGPRKHTLP
VNKVVITRTPRTNVFYENNDTGPMQTSPTAIIEDTSTSPSQDIDNRLKTLQIQPRPRRNQ
EHVEHRELRRTSRNSGRYVEGQYMESDSE
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacagaaggggaggcaagcgtatccggatggatgatccagtgccgccggagtat
gagactccgatgacaccgatgacgccgatgacgccgatgacaccgatgaatgacaactct
ggcggggacgctaacgactcgtacaacacgtacgcgccgtacaatccggcatcgcagact
ccgcttcagaatcccaccccggagcattattcatccgagagttatagctcaccgggcacc
tcgcagcagcagcagtatcaggaacagtccggcaactttgacaatccggcacaatttgaa
gcgcccatgacacccgctactcccaacatgagaatcacaaggaacacgcgtgccagaatg
cgcggaggcgtggtacagcaacccaagtacaaggaagtcgacacggactatgctccatca
tccagtggcagcgggagagggagaggcagcggtggacgtggacgcggcaaacggacgcac
cattcgcacagcttggaggatgaagccagtctttactatgttattaggaataatcgttct
tcgctcacgaccattgtcgatgactggatagaaaagtataaaagcaacagggacaatgca
ctgcttatgttaatgcaattcttcatcaacgcaagtggttgcaagggtcgcatcactccc
gaaatgcaacagaccatggagcacgtggcaataattcgcaagatgactgaagaattcgac
gaggagagcggtgaatatccattgataatgactggacaacagtggaagaaattccgcgct
aatttttgcgaatttgtgcaaatccttgtccgccagtgtcagtactctatcatttacgat
caatttttgatggacaacgttatctccttgctgactggcctctcagattcacaagtaaga
gcattcaggcataccgcgacgcttgcagccatgaaattaatgacggctctggtagacgtt
gccttgactgtatcgataaatttggacaacacccagcggcagtatgaggcggagaggcag
aaagcccgtgagaaaagggcggcggacagattagagtctctgatggcaaagcgaaaggag
ctggaagaaaacatggacgaaatcaaaaatatgcttacgtacatgttcaagtcggttttc
gtgcacaggtacagagacacgttgccggagatacgtgcgatttgcatggcggaaattgga
gtctggatgaagaagttccaccaaaacttcttggacgattcgtacttgaagtacattggc
tggaccttgcacgacaaagtcggcgaagtcaggctcaagtgcctgcaggcgctgcagccg
ttgtacgcgtcggaggagctgaaaacgaagctcgagctgttcacgagtaagttcaaggac
aggatcgtcgcgatgacgctggacaaggagtacgacgtggcggtgcaagcggtgaagctg
gttatctcgatccttaagcaccaccgtgagatcctcaccgacaaggactgcgagcacgtg
tatgaactcgtttactcgtcgcatcgggcggtcgcccaagcagccggcgagttcctgaac
gagcgtctgttccgtccggacgacgaggccgtggcaggcatcaagacgaggcgcggcaag
aagcgcttgccgaacacgcccctgatacgtgacctcgttcttttcttcatcgaatccgag
ttgcacgagcacggagcctacctggtcgattctctgatcgagacgaaccagatgatgaag
gattgggagtgcatgacggatctgttgctcgaggaggccggtccggacgaggaggcgttg
gacaatcagaaggaaacgtctctcatcgagctgatggtgtgctgtataaaacaagccgcc
acgggcgaggcgccggtcggtcgcggacccacgcggaagattctctcggtgaaggagctg
aagcaagtgcacgacgacaagcaaaggctgacggagcatttcatacaagcgttgccactt
ttgctcgacaaataccgcgcggatcccgaaaaactggccaacttacttgcgattccacag
tacttcgacttggatatttatacgaaatcgcgacaagaaatcaatctggattctttattg
agcaaactccacgggatcgtggagaagatgcacgacaccgaggttctagatacggcagct
aaaacattggagcacatgtgcgtggagggccacgctatcttcaccagatgtgatgtcgct
cgttccacattgatcgattccattgtgaataaatacaaggaagcgattgatgaatataga
aatttaatcgagggagacgaggaaccggacgaggatgagatattcaatgttgtccaatct
ctcaagaaagttgccatattttattcttgtcacaatatgaatccgtggggaatatgggat
tcgctgtacaaagatatagaggacgctaaggatccttcaaaatgtttaccatacgaggca
gttaaatattgcataagcgcatgcttcttcgctattctgtggggtcagaatcatttgatg
gaagctgtggactttggtactcgcggcgaggaggaatgccgtcaattgaaggaacggcta
cactcgttcatgggctcgatgcgtcacttcgtcagtagcgacagcagcggcgcgccatct
ccgccgatcttaagggaagaagcgtataacacgatatgcgacctattggtggtgttttgc
agtcaactgtccactcatgccaatcctttgatgcatcaattagtgtacgagcccgaccaa
gcaatgcagaacatgctcaatagatttatacaagagtacgtcttctttgaagaggaagat
gatgaacacgacgagcattcaaaaatcgaagagttacataagcggagaaacttcctagct
ggttactgcaagttgatagtgtacaacatgattcccacgaaagctgcggccgacgtgttc
aaacattacgtgaaatattacaacgactatggcgacatcattaaaaccacgttgggaaaa
gcgagggacattaacaagacgaattgtgcgctgacgatgcagcagagcttaaatattttg
tacaacgagattgtggcggagaagggcaaggtgaacagaaacagcgaggaatttaccgcg
atcaaggaactcgcgaagcgattcgctctgtccttcggtctggacgccgtgaaaaatcgc
gaggcgatcacggccctgcatcgcgctggcgtcttgttcgccattactccaccggacggc
atcgaacaggatcctacgggcccaccaccgaatttaccgttcctcgagatattattagaa
ttcaccaataagcttctcaagcaggataaacgagtcgtactcaactttctggacagacgg
ttgcaggctggaatgccgtcttcacgaggagaggactggcaacctttgcttttgtacaga
aatagtttgctacacggtgaaactgaccaagtgccggtgacgagtaagcgagcttacacg
aggcgtaagaaggatcatttagctgaggaagaggaagctgatgaacctgatgaaggttct
gatcatgagtttgcgggcaagcacaaaaaaaaacgtggtccacgaaagcatacattacca
gttaataaagtggtgataacacgcacacccagaacaaatgtattttatgaaaataatgac
actggtccaatgcaaacgtcccctacagctatcatagaagatacgtcaacaagtccttcg
caagatatcgataatagacttaaaacgttacaaatacagccaaggccacgaagaaatcaa
gagcatgtagagcacagagaattgcgaagaacctccaggaattcaggtcgatacgtcgaa
gggcaatatatggaatcagattccgagtga
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