Ooceraea biroi (clonal raider ant): 105287462
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Entry
105287462 CDS
T05778
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105287462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105287462
03032 DNA replication proteins [BR:
obo03032
]
105287462
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105287462
mRNA cycle factors
Common to processing body (P body) and stress granule
105287462
DNA replication proteins [BR:
obo03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
105287462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
105287462
NCBI-ProteinID:
XP_026828205
LinkDB
All DBs
Position
9:10704212..10709226
Genome browser
AA seq
1037 aa
AA seq
DB search
MRRSCNPTAEARTVDCLEATRRLHKNVTEIIKKLDEQKSRALTVVDIFVPLVEVLRAKLK
DYCARLILKDPVGNAHKIEGQLWRKAFYDVVYAAKKLRKDNWNDSEKALLSVHLTAGVGY
YHHLILKLQIEYDLDLIGIVDFAFVQTETISSYARTKTGQSKTYGKEVKQCVMRLVHRSL
VCLGDLTRYKLELDSNWDPMIANRYYKMAIAVDPNVGMPHNQLGTIAGDSNYGLDAVYYF
LRGTLCPEPFERTEENLKRNILTYSTCTDENNSVHHCVSRLFSLLRLWDQENPNSDKINQ
ECQDLLTNLENCLSMERMEPSNGNSLENVDNIEAYLQNCKNRPTLYLTDDMVFKIVTICL
MSISRLKSKESNEVQGVVAVTLAILSQLLQFTITKLQETIMNMAASDMEAILKVDSYSSK
LQSTQDSRVLSECESNGDCTRKEEPTLNQDNNVPDPNEKDDKSAVDGKAESVDNGVLSKS
GPKRTREKSKNLLSKLRRRKRRTRTSSDSDTSDVDQSALASSSDEINSDVSETEEDDALS
EENDDALSDDGLSDNNTDDEVQIIENATAKEEMNGHTSESSDKTELCDEKGDTNHNLVNG
ERHAAEQADSKVTSDKDSAMNSNSATTITTNTDSISTFDETNGHSHNQNSISHMAQLKKC
SLKPDDVLNMLIDKEILASIKVCCDWLRSNPDIVRICAKSSRTLLKRVAILLNLIDVDTN
GLAQRNGDLAILSSEERLKLCVRTVPLPEDIDLKGLHLLEDAHRPLDWQMLRKHRMNKRE
ETLLRTLKLIEFGHHLTSIQNSGVQYDQTERSFVVADANPVDDRPKTIGLDEKNFGPEHS
RGKLMRHMGKLWLKAEVRALENQLRSRLMSPYLVPDHEALTKHTPALKRLVYTKKFIVVI
PSIVVSALDEMKRVSSQAREATRWLETQLRRGSRFLRAQRPQERLALPLIKGPRPKDKEA
WLFFQIIECCHYLTQQAKMGFTGDGEAPVVTLLTGCNLEDRKALTFSPDGLAKSAGVNLE
HIESFQMKWKSSSKSHG
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgaggagatcgtgtaaccccacggcggaggcccgaacagtggactgcctcgaagccacg
agacgcctgcacaagaatgtgacagagattatcaagaagttggatgaacagaaaagtcgt
gctctaacggtagtcgacatatttgtcccattggtggaagttctgcgtgcaaagctcaag
gattactgcgcaagattgatactgaaagatcctgttggaaatgcacacaaaatcgaggga
caattatggcgaaaggccttttacgatgttgtgtatgcagcaaagaaattgcggaaggat
aattggaatgattcggagaaagcgttgctatcagtccatttaacagctggggtaggctat
tatcatcatctgatactgaagctgcaaatcgagtatgatttagatctcattggtattgtt
gactttgcgtttgttcagacggaaactatttcatcatacgcaagaaccaagacaggccaa
tccaagacttatggcaaggaggtgaaacaatgtgtcatgcgcttagtccaccgaagtctg
gtatgtctcggagacctgaccaggtacaaattagaattagactcaaattgggatccaatg
atagcaaacagatactataaaatggctatagccgttgatcccaacgtcggtatgcctcac
aatcaacttggcactatagcgggtgacagtaattacggactggatgcagtctattatttc
ttgagaggtactctgtgtcctgagccatttgaaagaacggaagagaatttgaaaagaaat
atcttgacttattccacttgtactgatgaaaataattctgttcatcactgcgtatcgcga
ttattctctttgttacgtttgtgggatcaggagaacccaaattctgataaaatcaatcag
gaatgccaggatcttttaaccaacttggagaattgcttaagcatggaacgtatggaacca
agcaatgggaattcccttgaaaacgtggacaatatagaggcgtaccttcaaaattgcaag
aatcgaccaacgctttatctaacagacgacatggtgtttaagatcgtgacaatatgctta
atgtcaatttctagattaaagagtaaggagtccaacgaggtgcagggcgtcgttgccgtg
actttagcaatattatctcaattgctacaatttacaataacaaaactgcaggaaacaatc
atgaacatggcggcatcagatatggaggcgattctcaaagtggattcttactcctcgaag
ctacaaagtacacaggacagtcgcgtattatccgagtgcgagagcaacggagattgtacg
agaaaagaggagccgactttgaatcaagacaataatgttcccgacccaaatgaaaaagat
gataaatctgccgttgatggaaaagcggagtccgtggataatggcgtcctgagtaaatcg
ggtcccaagaggactcgcgaaaagtccaagaaccttctcagcaagctgcgtaggcggaag
aggagaacgaggactagttccgactcggatacgagcgatgtagatcagtcggcgttggca
tcgtccagcgacgagatcaactcggacgtatcggagacggaggaggatgacgcgctgagc
gaagagaacgatgatgcgctgtcggatgacggtttgtcggataataacacggacgacgaa
gtccagatcattgaaaatgcgacggcgaaggaagagatgaacggtcacaccagcgagagc
tccgacaagacggagctctgcgatgaaaagggcgacactaatcataatctggttaatggc
gaacggcacgcggctgaacaagcggattcaaaagtgacgagcgacaaggattccgcaatg
aattccaacagcgccacaaccatcacgaccaacacggactcgatcagcaccttcgacgag
actaacggtcattcacacaaccagaatagcatctctcacatggcacagctgaaaaagtgc
agcttgaagccggacgatgtcctgaacatgttgatcgacaaggaaattctcgcgtctatc
aaggtgtgctgcgactggttgcgaagtaatccggatatcgtgcggatatgcgccaagagt
tcgcggacgttgctgaagcgtgtcgcgatcctgttgaatctgatcgacgtggacaccaac
ggtctcgcacagaggaacggcgaccttgccattttgtcgagcgaggaaagactgaagctg
tgcgtgagaacggtaccgctgccggaggatatcgatctgaagggactgcatctgctggag
gatgctcacagacctctcgattggcaaatgttgcgcaagcaccgaatgaacaagcgggag
gagacgttgctgagaacgttgaagctaatcgagttcgggcatcatcttacttccatccag
aactccggggtgcagtacgatcagaccgagcgttcgttcgtagtggcggacgcgaatccc
gtagatgataggccgaagacgataggcttggacgagaagaacttcgggccggagcactcg
cgcggcaagctcatgaggcacatgggcaaactgtggctgaaggccgaggttcgggcttta
gaaaaccagttacgatctcggctgatgtcgccgtatcttgtgccggatcacgaggccttg
accaaacacacgccggctctcaagcgtctggtgtacacgaagaagtttatagtggtgatt
ccctcaattgtcgtctcagccttggacgagatgaagcgcgtcagcagccaggcaagagaa
gcaacgcgatggctcgagacgcagttgagacgtggctcgagattcctgcgggcccagaga
cctcaggagcgtttagcactccctctgatcaaaggtcctagaccgaaagacaaggaagcg
tggttgtttttccagataatagagtgctgccactatctcacgcagcaggcgaagatgggc
tttaccggtgacggcgaggcgccggtggttaccctcttgactggttgcaacctggaagac
agaaaagctctgacttttagtcccgatggattagctaaaagtgcaggtgttaatctcgaa
cacatagaatcgtttcaaatgaagtggaaatcgtcgagtaagagccacggctga
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integrated database retrieval system
