Ooceraea biroi (clonal raider ant): 105287523
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Entry
105287523 CDS
T05778
Name
(RefSeq) cullin-4A
KO
K10609
cullin 4
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03420
Nucleotide excision repair
obo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105287523
09124 Replication and repair
03420 Nucleotide excision repair
105287523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obo04121
]
105287523
03400 DNA repair and recombination proteins [BR:
obo03400
]
105287523
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obo04147
]
105287523
Ubiquitin system [BR:
obo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
105287523
DNA repair and recombination proteins [BR:
obo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
105287523
TCR (transcription coupled repair) factors
Cul4-CSA complex
105287523
Exosome [BR:
obo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105287523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
105287523
NCBI-ProteinID:
XP_011351411
LinkDB
All DBs
Position
5:complement(6377391..6383850)
Genome browser
AA seq
857 aa
AA seq
DB search
MSTFDDTKIVATRQVKKAATAVAGAAAAATVTVVAAVAAAATTATTAAAASDLNTGTALN
YASAAKRFKLAAVTSIAQRDETDVIGRDEIIMTDTATAAATDTQKRANFSALTVGNSNGV
NKISQNLANAKPGSAKKLIIKNFKHKPKLPENYQEQTWEKLQEAVVAIQTSKSIGYSLEE
LYQAVENMCNHKMASTLYTNLTILTESHVKANIEQFLAESMDRHIFLKKMNECWQSHCRQ
MIMIRSIFLYLDRTYVLQNPGISSIWDMGLHLFRLHIVLNNLVQTRTVEGLLMLIEKERQ
GDTVDRTLLKSLLRMLSDLQIYQEAFETKFLVATERLYAAEGQRLMSEHDVPEYLAHVDK
RLQEENERLLHYLDTTTKWSLIHTVEKQLLSEHITSILQKGLSGLLDENRINDLSLLYNL
YSRIKNGLVELCLNFNSYIKKKGKTIVIDPEKDKTMVQELLDFKDKMDNIVNTCFHKNEK
FANSLKEAFEAFINQRANKPAELIAKFVDCKLRAGNKEATEEELERLLDKIMVLFRFIHG
KDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTSKLEGMFKDMELSKDIN
IAFKQYAGNLQNELAANNLDLTVSILTMGYWPTYPVMEVTLPMEMVQYQDVFNKFYLGKH
SGRKLQWQPTLGHCVLKAWFNQGNKELQVSLFQALVLILFNDSDNLSLEDIKTATNIEDG
ELRRTLQSLACGKARVLQKNPRGRDVADNDRFVFNAEFTNKLFRIKINQIQMKETNEEQK
ATEERVYQDRQYQIDAAIVRIMKMRKTLTHNLLISELYNQLKFPVKPADLKKRIESLIDR
DYMERDKDNANQYNYVA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgttcgatgataccaagattgtggccacaagacaggtgaagaaggcggccacc
gctgtcgccggtgccgccgccgctgccactgtcaccgtcgtcgctgctgttgctgctgcc
gccaccactgccaccaccgctgccgccgccagcgatctgaacacaggcacagcactgaac
tacgcgagcgctgccaagcgcttcaagctggccgcggtcacgagcatcgcgcaacgagac
gagaccgacgtgatcgggagggacgagatcatcatgacggacacggcgactgccgccgcg
accgacacgcagaagcgagccaatttctcggcgttaaccgtcggcaattcgaatggcgtc
aacaagatctcgcagaatctagcgaacgcgaaacctggctccgccaagaagctcatcatc
aagaacttcaaacataaacccaaattgccagagaactatcaagaacaaacatgggaaaaa
ttgcaagaggctgtggttgccatacaaaccagcaaaagtatcggctactctctggaggag
ctctaccaggcggttgaaaatatgtgtaatcacaaaatggcatcgacgctttatacaaat
ttgactattctgacagaatctcacgtgaaagctaatatcgagcaatttctggcagagtct
atggacagacatatatttcttaagaaaatgaacgagtgttggcaatcacattgtagacaa
atgatcatgatccggagcattttcttgtatctcgacaggacatacgttctacaaaatcca
ggcatatcgtcgatatgggatatgggattgcatctcttcagattacatattgtgttgaac
aacctggtgcaaacgcgtacagttgagggtctgcttatgctgatagaaaaggaacggcaa
ggcgataccgtagatcgtacacttctcaagtcattgttaaggatgttgtccgatctgcaa
atctaccaagaggccttcgaaacaaagttcctagtagctacagaaagattgtacgctgct
gaaggtcaacgattgatgagcgagcatgacgttcctgaatatctggctcatgtggataag
cgactgcaagaggaaaatgagcgactgttacattatctcgatacaacgaccaagtggtca
ctcatacacactgtagaaaagcaattactctccgaacatattactagcattttacagaaa
ggtttaagtggattgttggacgagaataggattaacgatttatcgttactttacaactta
tacagtcggataaaaaatggccttgtggagctttgtttgaattttaattcctacattaag
aaaaagggcaagacaatagttatagatcccgaaaaggataaaacgatggtgcaggaactg
ctagatttcaaggacaaaatggataacatagtcaacacgtgttttcataaaaatgagaag
tttgcgaatagcttaaaagaagccttcgaagcttttattaatcagagagcaaacaagccg
gcggaattaatagctaaatttgtcgactgtaaattgcgcgcgggtaacaaggaagcgacg
gaagaagaattggaaagattgttagataagattatggtgctcttccgatttatccatggc
aaggacgttttcgaagcgttttacaaaaaggatttggccaaacgtttgttagtaggaaaa
tcggcatcggtggacgcggagaagtcgatgttgtcaaagttaaagcaagaatgcggtggt
ggttttactagtaaattggaaggaatgtttaaggatatggaacttagcaaagatatcaat
attgcgttcaaacagtacgcaggaaacttgcagaacgagctagcagcaaacaatctggac
ttgactgtgtctatactaactatgggatattggcctacgtatcctgtaatggaagtcacc
ctgccgatggaaatggtgcagtatcaggatgtctttaacaaattttacttgggaaagcac
agtggcagaaaattacaatggcaaccaactttgggacattgtgtgttgaaagcgtggttc
aatcagggtaataaggagctacaagtatcgctattccaagcattggttttaattttattc
aacgactctgacaacctttcattggaagacatcaaaaccgccacgaatatcgaggatggc
gagctgaggagaacgctgcagtctctggcatgcggaaaagcgcgtgtccttcaaaagaat
ccgcgtggtcgcgacgtcgccgacaatgatagattcgtgttcaacgccgagttcacgaat
aaactgtttaggatcaagatcaaccaaatccaaatgaaggaaacgaacgaggaacagaaa
gcgacggaggagagagtgtatcaggataggcaatatcaaatagatgctgctatcgttaga
attatgaaaatgaggaaaacgctcacacacaatcttctcatcagcgaactgtataatcaa
ctaaagtttcctgtaaagcctgcagatttgaagaaacggatcgagtctcttatagacaga
gattacatggagagagacaaggacaacgcgaaccagtacaattacgttgcgtaa
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