Ooceraea biroi (clonal raider ant): 105287540
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Entry
105287540 CDS
T05778
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03020
RNA polymerase
obo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105287540
09124 Replication and repair
03420 Nucleotide excision repair
105287540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obo03021
]
105287540
03400 DNA repair and recombination proteins [BR:
obo03400
]
105287540
Transcription machinery [BR:
obo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
105287540
DNA repair and recombination proteins [BR:
obo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105287540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
105287540
NCBI-ProteinID:
XP_011351433
LinkDB
All DBs
Position
5:6978687..6980187
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AA seq
276 aa
AA seq
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MPYANQPSVHISDLTEENVKFQVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLS
DEFLAHRIGMIPLISDDVVDRIQFTRDCQCMDFCPECSVEFTLDVKCTEDSTRHVTTADF
KSSDPRVLPVTSRHREDEASEYGETDEIVIVKLRKGQELKIRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNSMRHTKFPKPDEWPKSEYTELEEDQYEAAYNWEAKPNKYYFNVEGSGALK
PENIVMMGIAALKNKLSNLQTQLSHEVQSDALSIHH
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgccaatcaaccgtcggtccatatctcggatttaaccgaggagaatgttaag
tttcaggtagaagatacggaattgagtgttgcgaacagcatgagacgcgtcttcatcgcc
gaaactccgacaatggccatcgattgggtccaactggaggctaattctactgttctgagc
gacgaattcctagcacacagaatagggatgataccgttgataagtgatgatgtcgttgac
agaatacaattcacaagagattgtcagtgcatggatttctgtcctgaatgtagcgtagaa
ttcaccctggatgttaaatgcaccgaggattcaaccagacatgtgaccactgctgacttc
aagtccagtgaccctagagtgttgcctgtcacatccaggcatagggaagacgaagcgagc
gagtacggagagacggatgagattgtgatagtgaagcttaggaaagggcaggaattgaaa
atcagagcgtatgcgaagaaaggtttcgggaaggagcacgctaaatggaatccgactgct
ggcgtgagctttgaatacgatccagataattccatgagacacaccaagttccccaaaccg
gacgagtggcccaagtcggaatacactgaactggaggaggatcaatacgaagcggcgtat
aactgggaggccaaaccaaacaaatattatttcaacgtggaaggtagcggcgccttaaaa
cccgagaacatcgtcatgatgggaatcgctgcgttgaaaaataaattgtcgaatttacag
acgcaattgagccacgaggtgcagagcgacgcgttgagcattcatcattag
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