Ooceraea biroi (clonal raider ant): 105287855
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Entry
105287855 CDS
T05778
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105287855 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105287855 (CPSF2)
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105287855 (CPSF2)
U7-dependent histone pre-mRNA processing factors
105287855 (CPSF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
105287855
NCBI-ProteinID:
XP_026827507
LinkDB
All DBs
Position
8:complement(6784235..6788101)
Genome browser
AA seq
737 aa
AA seq
DB search
MTSIIKLLAISGAMDESPPCYILQVDELRILLDCGWDENFDHDFMRELKRHVNQIDAVLL
SYPDPLHLGALPYLVGRCGLNCPIYATIPVYKMGQMFMYDMYQSRHNMEDFDLFTLDDVD
AAFDRIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKK
ERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTA
GRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARN
NPFQFKHLQLCHSMAELSQVPSPKVVLASTPDMECGFSRELFLQWCTNPQNSIILTSRTS
PGTLARDLVERGGNRNITLEVKRRVRLEGAELEEHQKREKLKQEQMKQEQMETADVSSES
EDEIEVGGARGKHDLLVKQETKPGFFKQSKKQHPIFPFVEEKIKIDEYGEIIKPEDYKIA
ETAPEVDENKENTETKHEEINHHPEIAADIPTKCVQVSRTMTVNAEVTYIDFEGRSDGES
LQKILAQLRPRRVVLVRGSPKDSEILAQQAQSAGARVFIPGRGETLDATTETHIYQVRLT
DALVSGLNFSKGKGDAEVAWIDAMITARNHVCRDAIADKESENAIAESDKILTLEPLPLN
EVPGHQTTFINELKLSDFKQVLNKSNIPSEFSGGVLWCCNNTIAVRRHEAGKVILEGCIS
EDYYKVRELLYEQYAIV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgacatccatcataaagctacttgctatttctggggcaatggatgagtctccgccttgc
tacatactgcaagtagatgaactaagaatattattggactgtgggtgggacgagaacttt
gatcatgatttcatgagagaattgaaaaggcacgttaatcaaatagatgcggtattactt
tcatacccagatcctttacatttgggcgcactgccctacctggttggcagatgtggctta
aattgtcccatatatgccaccatacctgtctacaaaatgggccagatgttcatgtacgac
atgtatcagtcccgccacaacatggaagatttcgatttatttacgttggacgacgtcgac
gccgcgttcgacaggatcgtgcagctgaagtacaatcagagtatctcgatgaagggcaag
ggatacggcgttacgctgaccccgttgccagcgggtcacatgatcggcggaacgatttgg
aagatcgtgaaggtgggcgaggaggatataatatacgcggtggatttcaatcacaagaag
gagcgccacttgaacggttgcgagttggagagactgcagaggccgtccttgttaataacg
gatgcgttcaacgctacctaccagcaggccagacgaaggacgagggacgagaaactgatg
actaatatcttgcaaacattgcgaggtggcggcaacgtgttggtcagcgtggacaccgcc
ggccgtgtactggaactggcgcacatgctggaccagctctggcgtaacaaggaatcaggg
ttgcttgcctactcgttagctctccttaataatgtgagctacaacgtcgtggaatttgcg
aaatcgcagatcgagtggatgagcgataagctgatgaggagcttcgagggtgcgcgcaac
aatccgttccagtttaagcacctgcagctctgccacagtatggccgagctgagtcaagtc
ccgagtccgaaggtggtgctcgcgagcactccggacatggaatgcggattctctcgtgaa
ttgtttcttcagtggtgcaccaatccgcagaacagtattatattaacgagcaggacatct
ccaggcactcttgccagagatttagtggagagaggtggaaaccgaaatattacgctggaa
gtgaagagacgagtgagactcgagggcgctgagctggaggaacatcagaaaagagaaaag
ttgaaacaggagcagatgaagcaagagcaaatggaaactgcagatgtgagttccgagtcg
gaagacgagatagaggtcggtggtgcgagagggaaacacgatttattggtgaaacaagaa
actaaacccggtttctttaaacagagtaagaaacaacatccaatattcccatttgtcgaa
gaaaaaatcaagatagacgaatatggagaaattataaagccagaagattacaaaatagcg
gagaccgcaccggaggtggacgaaaataaggaaaatactgaaacgaaacacgaagaaatc
aatcaccacccggagatagctgcggatattccgacaaaatgtgtacaggtgtcgcgtacg
atgaccgttaacgcggaagtgacgtacatagatttcgaaggcagatccgacggagaatcc
ctgcaaaaaatattggcgcagctgagaccaaggagagtggtcttggtcagaggttcaccc
aaggactcggaaatattggcccagcaagcgcaaagtgccggcgcgagggtgttcattcca
ggcaggggggagacgctggacgccacgacggaaacgcatatttatcaggtacgtttgacc
gatgctctagtcagtgggctgaacttctcgaagggtaagggtgacgcggaggtagcgtgg
atagatgcgatgataacggcgcgcaatcacgtttgtcgagacgccatcgccgacaaagag
agtgagaacgcgatcgccgaaagtgacaagatactgactctcgagcctttgccgttaaac
gaggtacctggccatcaaacgacatttataaacgagttgaaactgtcggactttaaacag
gtgttgaataagagtaacattccgtccgaatttagtggaggagttttgtggtgttgcaac
aataccatcgccgttagaaggcacgaagctgggaaagtaatactggaaggctgcatttcc
gaagattattataaagtgcgggagctattgtatgaacaatatgctattgtgtaa
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integrated database retrieval system
