KEGG   Ooceraea biroi (clonal raider ant): 105288114
Entry
105288114         CDS       T05778                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03030  DNA replication
obo03410  Base excision repair
obo03420  Nucleotide excision repair
obo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105288114
   03410 Base excision repair
    105288114
   03420 Nucleotide excision repair
    105288114
   03430 Mismatch repair
    105288114
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:obo03032]
    105288114
   03036 Chromosome and associated proteins [BR:obo03036]
    105288114
   03400 DNA repair and recombination proteins [BR:obo03400]
    105288114
DNA replication proteins [BR:obo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105288114
  DNA Replication Termination Factors
   ELG1-RFC complex
    105288114
Chromosome and associated proteins [BR:obo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105288114
DNA repair and recombination proteins [BR:obo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105288114
  Check point factors
   HRAD17(Rad24)-RFC complex
    105288114
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 AAA_16 Rad17 AAA_22 RuvB_N AAA_11 AAA_30 AAA_14 bpMoxR DUF815 AAA_assoc_2 ResIII Mg_chelatase AAA_24 AAA_2 AAA_7 AAA_19 NB-ARC AAA_5 TniB RNA_helicase Bac_DnaA DNAX_ATPase_lid AAA_3 DJC28_CD SLFN-g3_helicase ATPase_2 nSTAND3 AAA_28 AAA_29
Other DBs
NCBI-GeneID: 105288114
NCBI-ProteinID: XP_011352436
LinkDB
Position
7:15373917..15376509
AA seq 371 aa
MHAFLKTGKLGALADVKKPSTSRANNDKKNLMPWVEKYRPKNVDDIVEQTEVVNVIRQAM
ERGDFPNMLFYGPPGTGKTSIIHAAARQMFGSMYKDRILELNASDDRGIQVVREKIKSFA
LRRANPTGPDGKKCPPFKIIILDEADSMTGTAQTALRRIMEKEAHSTRFCLVCNYLSRII
KPIASRCTKFRFKPLSDEKSIARLEYICNEESLKADRSVLERIVEASGGDLRQAVMCLQS
ITRLKGKDHEITVEDALDVIGLVPDHVIDTLWEACKKGNYSNIQKLLDDLLLEGYPASQV
IEQLNERVIFSNELTDQQKVRIGDALGVCDYRLTEGSDEYLQLLNVFSTILSTYSSICDR
NQTGIIQISLN
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgcacgcgttcttgaagaccgggaaattgggcgccctagccgacgttaagaaaccatcg
acctcccgcgcgaacaatgacaagaagaatctcatgccatgggtagagaaatatcggccg
aagaatgtcgacgacatcgtggagcagacggaggtggtgaacgtgataaggcaagccatg
gagcgtggcgacttccctaacatgctgttttacgggccacccggtaccggcaagaccagc
atcatccacgcggctgcgaggcagatgttcggcagcatgtacaaggacaggatactagaa
ctaaatgcttccgacgacagaggcatccaggtcgtgagggagaagatcaagtccttcgca
ctgcgcagagctaatccgactggaccagacggaaagaaatgtcctccattcaagatcatc
atcctggacgaggcagacagtatgaccggtaccgcgcaaacggcacttcgtcgaatcatg
gagaaggaggcgcacagtacacgtttttgcctggtctgcaattatctgtcgcggatcatc
aagccgatcgcgtcgcgctgcaccaagttccggttcaagcccctgagcgatgaaaagagc
attgccaggctggaatacatatgcaacgaggagagtctgaaggccgacagaagtgtcctg
gagagaatagtcgaagcgtcaggtggcgacttgaggcaggctgtcatgtgcttgcaatcg
atcacgcgactgaaaggcaaggaccacgagatcactgtggaggatgccctggacgtgatt
gggttggtgcctgatcatgtaattgatacgttgtgggaggcctgtaagaagggaaactat
tcaaatattcaaaagttgctcgatgatttattactggaaggatatccagcatcacaggtg
attgaacaattgaacgagagggttattttctccaacgaattaactgaccagcagaaagtg
cgaattggtgatgcgctcggcgtatgcgattataggctaacggaaggaagcgatgagtat
ctgcagcttttgaatgtgttttctaccatcttgtcaacatacagttcaatttgtgatcgt
aaccagacagggattatccaaatttcactaaactag

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