Ooceraea biroi (clonal raider ant): 105288114
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Entry
105288114 CDS
T05778
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03030
DNA replication
obo03410
Base excision repair
obo03420
Nucleotide excision repair
obo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105288114
03410 Base excision repair
105288114
03420 Nucleotide excision repair
105288114
03430 Mismatch repair
105288114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obo03032
]
105288114
03036 Chromosome and associated proteins [BR:
obo03036
]
105288114
03400 DNA repair and recombination proteins [BR:
obo03400
]
105288114
DNA replication proteins [BR:
obo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105288114
DNA Replication Termination Factors
ELG1-RFC complex
105288114
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105288114
DNA repair and recombination proteins [BR:
obo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105288114
Check point factors
HRAD17(Rad24)-RFC complex
105288114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_16
Rad17
AAA_22
RuvB_N
AAA_11
AAA_30
AAA_14
bpMoxR
DUF815
AAA_assoc_2
ResIII
Mg_chelatase
AAA_24
AAA_2
AAA_7
AAA_19
NB-ARC
AAA_5
TniB
RNA_helicase
Bac_DnaA
DNAX_ATPase_lid
AAA_3
DJC28_CD
SLFN-g3_helicase
ATPase_2
nSTAND3
AAA_28
AAA_29
Motif
Other DBs
NCBI-GeneID:
105288114
NCBI-ProteinID:
XP_011352436
LinkDB
All DBs
Position
7:15373917..15376509
Genome browser
AA seq
371 aa
AA seq
DB search
MHAFLKTGKLGALADVKKPSTSRANNDKKNLMPWVEKYRPKNVDDIVEQTEVVNVIRQAM
ERGDFPNMLFYGPPGTGKTSIIHAAARQMFGSMYKDRILELNASDDRGIQVVREKIKSFA
LRRANPTGPDGKKCPPFKIIILDEADSMTGTAQTALRRIMEKEAHSTRFCLVCNYLSRII
KPIASRCTKFRFKPLSDEKSIARLEYICNEESLKADRSVLERIVEASGGDLRQAVMCLQS
ITRLKGKDHEITVEDALDVIGLVPDHVIDTLWEACKKGNYSNIQKLLDDLLLEGYPASQV
IEQLNERVIFSNELTDQQKVRIGDALGVCDYRLTEGSDEYLQLLNVFSTILSTYSSICDR
NQTGIIQISLN
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgttcttgaagaccgggaaattgggcgccctagccgacgttaagaaaccatcg
acctcccgcgcgaacaatgacaagaagaatctcatgccatgggtagagaaatatcggccg
aagaatgtcgacgacatcgtggagcagacggaggtggtgaacgtgataaggcaagccatg
gagcgtggcgacttccctaacatgctgttttacgggccacccggtaccggcaagaccagc
atcatccacgcggctgcgaggcagatgttcggcagcatgtacaaggacaggatactagaa
ctaaatgcttccgacgacagaggcatccaggtcgtgagggagaagatcaagtccttcgca
ctgcgcagagctaatccgactggaccagacggaaagaaatgtcctccattcaagatcatc
atcctggacgaggcagacagtatgaccggtaccgcgcaaacggcacttcgtcgaatcatg
gagaaggaggcgcacagtacacgtttttgcctggtctgcaattatctgtcgcggatcatc
aagccgatcgcgtcgcgctgcaccaagttccggttcaagcccctgagcgatgaaaagagc
attgccaggctggaatacatatgcaacgaggagagtctgaaggccgacagaagtgtcctg
gagagaatagtcgaagcgtcaggtggcgacttgaggcaggctgtcatgtgcttgcaatcg
atcacgcgactgaaaggcaaggaccacgagatcactgtggaggatgccctggacgtgatt
gggttggtgcctgatcatgtaattgatacgttgtgggaggcctgtaagaagggaaactat
tcaaatattcaaaagttgctcgatgatttattactggaaggatatccagcatcacaggtg
attgaacaattgaacgagagggttattttctccaacgaattaactgaccagcagaaagtg
cgaattggtgatgcgctcggcgtatgcgattataggctaacggaaggaagcgatgagtat
ctgcagcttttgaatgtgttttctaccatcttgtcaacatacagttcaatttgtgatcgt
aaccagacagggattatccaaatttcactaaactag
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