KEGG   Ooceraea biroi (clonal raider ant): 105288239
Entry
105288239         CDS       T05778                                 
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105288239
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obo03019]
    105288239
   03041 Spliceosome [BR:obo03041]
    105288239
   03032 DNA replication proteins [BR:obo03032]
    105288239
Messenger RNA biogenesis [BR:obo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     105288239
Spliceosome [BR:obo03041]
 Complex A
  U1 snRNP components
   Sm proteins
    105288239
  U2 snRNP components
    105288239
 Complex B
  U1 snRNP components
    105288239
  U4/U6.U5 tri-snRNP components
    105288239
 Complex C
  U2 snRNP components
    105288239
DNA replication proteins [BR:obo03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     105288239
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 105288239
NCBI-ProteinID: XP_011352655
LinkDB
Position
11:complement(2528637..2529584)
AA seq 142 aa
MSIGVPIKVLHEAEGHIITCETNTGEVYRGKLIEAEDNMNCQMQNITVTYRDGHVGQLEN
VYIRGSKIRFLILPDMLKNAPMFKRPGGKGSGTAGRGKSAILRAQARGRGRGQNQRGKGT
GSAPWLNQQNQPGGSQSGRGRG
NT seq 429 nt   +upstreamnt  +downstreamnt
atgtcgatcggagttcccatcaaagtgcttcacgaagccgagggtcacatcataacctgt
gagacgaataccggcgaggtgtatcgcggcaagctgatagaagcggaggataacatgaat
tgtcagatgcagaatatcacagtaacgtaccgagacggtcatgtcgggcaactcgaaaac
gtgtacatccgcggatcgaaaataagattcctcatattacctgatatgctgaagaacgct
cctatgtttaaacgacctggcggcaagggatcaggcaccgctggcagaggaaagtcagct
atattgcgcgctcaagctcgcggtagaggaagaggacaaaatcagagaggaaaaggcact
ggctcggcaccctggcttaatcaacagaatcagccaggtggatcccagtctggcagaggc
aggggttaa

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