Ooceraea biroi (clonal raider ant): 109611346
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Entry
109611346 CDS
T05778
Name
(RefSeq) neural-cadherin-like isoform X1
KO
K27892
neural-cadherin
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
obo04515
]
109611346
Cell adhesion molecules [BR:
obo04515
]
Cadherins
Cadherin related
109611346
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
RET_CLD1
Cadherin_pro
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
109611346
NCBI-ProteinID:
XP_019889152
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All DBs
Position
11:10545508..10613633
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AA seq
1173 aa
AA seq
DB search
MWRVQVVVFLLAATSVSHAKVAVLPHDVYPGYEVTQFRSDACRPSNFHLLETGFSKFFTV
LGNGLVMTTSDLTPLVDRAVHLIVLEELANGTQTHDLHLYVINRRNMLTFSHDRLGEGEV
LENSPVGTWIDGFPVLRARGSFPVHYKILPDDNGERPFALREDESNETGFNLTLKSQKQG
VRVVTARPLDREVRNLYTVVIHASDGNFISTSKISGVVHVLDKNDNSPVFERELYVFEIR
PTNLDTLHKGGMLPGWKRFSTVGKVTAKDADGDKVAYKLATRSSLLIVVPQTGELLLAGE
PEVGVEQDSECELIVEAHDLRTPSRSTEKPAKVVVRFLTSESDDENENRPEAHRIQKRRV
TRAVRPTKKVDFTEADGNVEGKIAFYLEKENEKETYKIRDENKWVTVGANGSVMVKQKWD
YEELGPEKTIDFWVTITNTEPCARYPPGVPCPYYDDTDNQRVIINMKDVNDEPPYFINRP
LPMQTVVQLNAPPNTHVFTLQARDPDTDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDL
FQLDMEYVLYVKAEDQNGRIDERRFQSTPEERLSIVGGKRAPQFYMTAYEAEIPENQKKD
SDIISVKAKSFADREIRYTLKAQGQGAAGTFNIGPTSGIVKLAKELDFEDLRQPHIYSLI
VTATEDSGGFSTSVELTIRVSDVNDNAPKFELPDYQAHNVDEDIPLGTNILKVKATDADS
GANAEIEYLVSDDHFSVDSNGIIVNNKQLDADNNNAYYEFIVTAKDKGEPSKTGTATVRI
YTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVRFRFVGGNTTSGQFVI
EEITGVIRLHGKEISLDRDKYELNVTALDDGACCPNGDQTIHTSTAVVVVFITDVNDNKP
VFKDCGMYYPKVEEGAPNGSTVIKVQATDEDKGVNGQVKYSIVQQPNQKGTKFTVDEETG
QVLTNKVFDREGDDGKFVSVTVKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQRYVEN
VKQDASIGTNILRVSASDEDADNNGAIVYSLSSPNNEQNLEYFEIQPESGWIVLKKPLDR
ETYKLEAMARDRGYPPLSRTVEVQIDVVDRANNPPVWDHVVYGPIYIKENMAVGAKVVSI
KARSVTLSMLRAALCTNPPCTQSRGSIVLVHVN
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgtgcaggtcgtcgtcttcctactggcagccacttccgtcagccacgccaag
gtggccgtgctgccacacgatgtctatcccggttacgaggtgacgcagtttcggagcgac
gcatgtcgcccgtccaacttccacctgctggagaccgggttctccaagttcttcaccgtg
ctgggtaacggcctggtgatgacgacgtcagatctcacaccgctggtggatcgcgcggtc
cacctgatcgtcctggaggagctggcgaacggcacgcagactcatgacctccatctctac
gtcatcaatcgccgtaacatgctgaccttctcgcacgaccgtctaggcgagggcgaggta
ctggagaactcgccagtcggcacgtggatagatgggtttccggtgctgcgggcacgtggc
agctttccggtgcactacaagatcctgccggacgataacggcgagcgtccgttcgccctg
cgcgaggacgagtccaacgagaccggattcaatctcacgttgaagagccagaagcagggt
gtccgcgtggtgaccgcgcggccgctcgaccgcgaagtccgcaatctctatactgtcgtg
atacacgcgtccgatggtaacttcatcagcacgtccaagatcagcggtgtggtccacgtg
ctggacaagaatgataatagtccggtatttgagcgcgagctgtatgtcttcgagatcaga
ccgaccaatctggacacgctgcacaagggtggcatgctgcccggctggaagagattctcc
accgtgggcaaggttacggccaaggacgccgacggggacaaggtcgcgtacaagctggcc
acacgcagcagtttgctgatcgtcgtgccgcagaccggcgagttgctgctcgccggtgaa
ccggaagtcggagtggaacaagacagcgagtgcgagctgatagtggaagcgcacgattta
cgcacgccaagtcgcagcaccgagaagccagccaaggtggtcgtgaggttcctcacgtcg
gaatcggacgatgagaacgagaaccgcccggaagcgcaccggatacagaagcgcagggtc
acccgggcagtacggccgacgaagaaggtcgacttcacagaggcggacggaaacgtcgag
ggcaaaatcgcgttttaccttgagaaggagaacgagaaggagacctacaagatcagggac
gagaacaagtgggtaactgtgggcgccaacggctccgtgatggtcaagcagaagtgggat
tatgaagagttaggtccggagaagaccatcgatttttgggtcaccatcacgaacacagag
ccgtgtgcgcgatatccacccggtgtcccgtgcccgtattacgacgataccgacaatcag
cgcgtcatcattaacatgaaggatgtgaacgacgagccaccgtatttcattaatcggccg
ctgccgatgcagacggtcgtccagctgaacgcaccgccgaacactcacgtgttcaccctc
caggccagggatcccgacaccgaccacaacatccattacttcatcgtgcgagatcgaact
ggtggccgctttgaggttgacgagaggtcgggagtggtgcgcactcgaggtaccgacctc
tttcagctggacatggagtatgtcctttacgtgaaagccgaggatcagaacggccgtatc
gacgagaggcgtttccagtcgactcctgaggagagactatcgatcgtcggtggaaaacgc
gcgccgcagttctatatgacagcgtacgaggctgagataccggagaaccagaagaaagac
tccgacataatatcggtgaaagccaaatcattcgccgatcgggagatacggtatacgctg
aaggcgcaaggtcaaggagccgcgggaacctttaacatcggtccaacctctggaatcgtg
aaacttgcgaaagaactggatttcgaggatctccggcaaccgcacatttattccctgata
gtgacagcgacggaggactccggtggtttctcgacatcagtcgagctgacgatccgggtg
tccgacgtgaatgataacgcccccaagttcgagctgccggattatcaggctcacaatgtc
gacgaggatatcccactggggacgaatatactgaaagtcaaggcgacggacgctgattca
ggagcgaacgcggaaatagagtacctggtatccgacgatcattttagcgtcgactccaac
ggcattatcgtcaacaacaagcagctcgatgcagacaacaataacgcctactacgaattc
atcgttactgctaaagataagggtgaaccgtcaaagaccggcacggcgaccgtgcggata
tacacgaagaataaaaacgacgaggagcctaagttctcgcagcaggtttacacgccgaac
gttgacgagaacgccggtccgaacaccctggtgaccaccgtggttgcatccgacaaggac
ggcgacaacgtgcgattccgattcgtcggcggaaatactacgtcaggccagttcgtgatc
gaagagatcaccggtgtaattcgtctccatggcaaggagatatccctagatcgcgacaag
tacgagctgaacgttaccgcgctggacgacggcgcgtgctgtccgaatggtgaccagacc
attcacaccagcactgcggttgtcgtggttttcatcaccgacgtgaacgacaacaagcca
gtcttcaaggattgtggcatgtattatccgaaggtggaggagggtgcgcccaacggtagc
acggtcatcaaggtgcaagctaccgacgaagacaagggtgttaacggtcaagtcaagtac
tcgatcgtgcagcagcctaatcagaagggcacgaaattcaccgtcgacgaggagaccggt
caggtcttgaccaataaggttttcgatcgcgaaggcgacgatggcaaatttgtgtccgtt
actgtcaaggcgacggatcagggcgaaccgtcgttggagggtgtttgctcatttaccgtc
gagataacggacgtgaacgacaacccgccgttgttcgatcgtcagaggtacgtggagaac
gtgaagcaggacgcgagcattggaacaaacatattgagagtgtcggcatccgacgaggat
gctgacaacaatggcgcaatcgtgtactcgctgagctcgcccaacaatgaacagaatctg
gagtactttgagattcaaccggagtccggttggatcgtattaaagaagcctctagaccgc
gagacgtacaagctggaagcgatggcccgagacaggggctacccgcccttgtcgcgaacg
gtggaggtacagattgacgttgtggaccgtgcgaataatccgcccgtatgggaccacgta
gtgtatggcccgatctacattaaagagaacatggccgtcggggctaaagttgtgtctatt
aaagccaggtctgtcacactgtcaatgctccgtgcggctctctgcacgaacccgccctgc
acgcaatctcgtggcagtattgttcttgtgcacgttaattga
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