Ooceraea biroi (clonal raider ant): 113561389
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Entry
113561389 CDS
T05778
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03018
RNA degradation
obo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113561389
09123 Folding, sorting and degradation
03018 RNA degradation
113561389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
113561389
03041 Spliceosome [BR:
obo03041
]
113561389
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113561389
mRNA degradation factors
5'-3' decay
Lsm complex
113561389
Spliceosome [BR:
obo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
113561389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
BPL_C
Hfq
LSM14
Motif
Other DBs
NCBI-GeneID:
113561389
NCBI-ProteinID:
XP_026829393
LinkDB
All DBs
Position
11:7634243..7635142
Genome browser
AA seq
91 aa
AA seq
DB search
MTTSVSTNPSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLQGFDDFVNMLLEDVTESEAT
PEGRRVTKLDQILLNGSNITMLVPGGEMPDS
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgactacctcggtcagcacgaatccgtctacgttgttaccactagaattggtcgacaag
tgcatcggttcgcggatacacattattatgaagaatgacaaggagattgtgggtaccctg
caaggtttcgacgatttcgtgaacatgttgctggaggacgtgaccgagagcgaagctact
ccagagggtcgcagagtcacgaagctggatcagattctcctgaacggcagcaacatcacc
atgctggtacctggtggcgagatgccagactcataa
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integrated database retrieval system
