Ooceraea biroi (clonal raider ant): 113563337
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Entry
113563337 CDS
T05778
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(I) chain-like
KO
K06237
collagen type IV alpha
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04382
Cornified envelope formation
obo04512
ECM-receptor interaction
obo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113563337
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113563337
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113563337
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obo04147
]
113563337
00536 Glycosaminoglycan binding proteins [BR:
obo00536
]
113563337
Exosome [BR:
obo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113563337
Glycosaminoglycan binding proteins [BR:
obo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113563337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_14
Motif
Other DBs
NCBI-GeneID:
113563337
NCBI-ProteinID:
XP_026830605
LinkDB
All DBs
Position
14:complement(3772283..3780840)
Genome browser
AA seq
982 aa
AA seq
DB search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NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgcggaggctggatgtcctcgtctctcccacggtttccagagcgtcgcgccatccctgg
tgggggcgtatcagcacacttggggtgctatccaaggatatatatgccgacgaagttact
tccaccatcagtcactgtcttggcttacctcagcactacggtgtgttttgtacgcacgga
tcggttggcacacgaacacacgcatgggaagagctaacaaaaaccgacgcaagtaatcac
gcggcaatatccgccggttttcctgcggagaaaacagaaagattagcagagattgcagtg
tcgaggatagagaaaagaaagttcgcaatttgcgacgtgtcccaacgtcaagctgacgag
ggatataattatcctaggccttcacaacctctccaaccaggtggtccgagtggaggtccg
agcggaaaaccgggaggaggatttccaggtactcctggtggatatccatccggcggccca
ggggcgcctggtcccggaggaccaggtatacctggcgggcaacctggaaagcctggtggt
ggttatccatcaccaggatatccaggtgaacgtcctggcggtactcaaccaggtgcacca
agtggacctgggagatttccatcaggacaaggtccttccgaaggatatcccagggaacgt
ccctcaattccctttccgagtggtgaaccgacagggaggcctggagcgggcccaggtggt
tatccatccggcggtccaggtgcacccggagggtttccatcaggaccaggtggtggatat
cctagtggccgacctggtgggcaaggaccttccggatatccgagcgggggcccaggaaag
ccagaagggcccggctatcccagtggacgaccgggtggaggatatcccagcggacaggtt
cctggaggtcatcccggcggagtacaaaagcctggtggcccgggaagtggatatcctagt
ggagggccaggatctggatatccagggggtgctcaaagacctggtggtggtccaagtcct
caaggaccaggcgggtatcctgggccaggaggaccaagcgggtatccgggaccgggagga
ccaagcggacctcaaggtcctggaggtcagcaaggcccaggaggatatccaagtggacca
ggaacacaaagaccaggcggctatccgagtggtcccggcccgcaaggaccgggtgggtat
ccaagcggtcccggagcgcaaggaccaggaggagtttcaggcggaccaagtccgcaagga
ccaggagggtttccaggtagacctggtactcaaagaccgggtggatatccaggcggacca
ggtcctcaaggaccgggtggatatccaggtggaccaggtcctcaaggaccgggtggatat
ccaggtggaccaggtccacaaggaccaggaggtttcccaggtagaccaggcacgcaaggc
ccgggtggaccaggtggaccaggtccacaagggccgggaggttttccagctggaccgggt
gcagtaggacatggaggaggagaatattctcatgatgaggaaggaacctatgacgaaggt
gattactcagctataccaggcgagcccggtcgcgactatcccatatacagcgaagttcca
gagactagtttccgttgcgacgctcaacaattccctggttactatgccgatgtggatgcc
cagtgccaagtttttcacatatgtgccaacaacaaaacttatgattttctttgtccgaat
ggaaccatcttcaatcagcaatttttcgtttgcgtatggtggaatcagttcgactgtaat
tctgcgccaagtttgtattatttgaacgaaaatctttatgattacacaataatgggaaca
ccaggtcaaggattccctggcaccgaaggaccttcgagaccttctggaccgggtacatat
ccaagtggtccaggcggtccaggcggtccaggtggtccaagtggtccaagcggtccaggc
ggttcaggaggacttcaaggcccatcagggccaggcggatatccaggaggacctcaaggg
ccatcgagaccaggtggatatccaggtggacctcaaggcccatcagggccaggcggatat
ccgggaggacctcaaggtccatcgaaaccaggtggatatccaggtggacctcaaggccca
tcagggccaggcggatatccgggaggacctcaaggtccatcgaaaccaggtggatatcca
ggtggacctcaaggcccatcagggccaggcggatatccgggaggacctcaaggtccatcg
aaaccaggtggatatccaggtggacctcaaggcccatcagggccaggcggatatccggga
ggacctcaaggtccatcgagaccaggtggatatccaggtggacctcaaggcccatcaggg
ccaggtggatatcctggcagaccttcaggtccttctggcccaggtggctacccaggaggt
ccctcaggtccatcgggaccaactggaccgggcggctatccaagcggtcctcaaggtcca
acaggccctagtggtccaggcggttttccaggacgaccaggcgctccatccggacctgga
tatcctggtccaggaccacaaggcccatctggccgtccagggcccggatacttaggtcca
tcaggaccacaaggacctactggccctactggaccaacgacaagacctagtggccccggt
ggttatccaggaccaagtggaccatctccaggatatccaggcagacctcagggacctact
ggaccgcaaggtccaagctatccgggtacaggtacacctggtgctcctagtggacctggt
ggatatcctagcggtagaccgagtggcccatcattcccttcgccaggaaaacctggcacg
ggttcaccattcccatcgcaaggcccgtcaaaaccagatcgtgagtacttgccgccgcgg
gctgaataa
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