Oryza brachyantha (malo sina): 102699310
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Entry
102699310 CDS
T02995
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03420
Nucleotide excision repair
obr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102699310
09124 Replication and repair
03420 Nucleotide excision repair
102699310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obr04121
]
102699310
03400 DNA repair and recombination proteins [BR:
obr03400
]
102699310
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
102699310
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
102699310
TCR (transcription coupled repair) factors
Cul4-CSA complex
102699310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
102699310
NCBI-ProteinID:
XP_006654871
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All DBs
Position
5:19960081..19968605
Genome browser
AA seq
1090 aa
AA seq
DB search
MSVWNYVVTAHKPTSVTHSCVGNFTGPSQLNLIVAKCTRIEIHLLTPQGLQPMIDVPIYG
RIATLELFRPHNETQDFLFIATERYKFCVLQWDGEKSELLTRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCVKPTIVVL
YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGAGLLIPVPAPLGGVIIIGEETIVYC
NANATFRAIPIKQSIIRAYGRVDPDGSRYLLGDNTGILHLLVLTHERERVTGLKIECLGE
TSIASSISYLDNGVVYVGSRFGDSQLVKLNLQADANGSYVEVLERYVNLGPIVDFCVVDL
DRQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVV
SFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAISDLLIQVTANSVRLVSCTSREL
VDQWNAPEGFSVNVASANASQVLLATGGGHLVYLEIRDSKLVEVKHIQLEHEISCVDLNP
IGDNPQYSSLAAVGMWTDISVRILSLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCA
LGDGHLFSFLLNASTGELTDRKKVSLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKK
LLYSNVNLKEVNHMCPFNTAAIPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRIC
HQEQSRTLAFCSFKHNQTSIEESETHFVRLLDHQTFEFLSIYQLDQYEHGCSIISCSFSD
DNNVYYCVGTAYVLPEENEPTKGRILVFAVEDGRLQLIVEKETKGAVYSLNAFNGKLLAA
INQKIQLYKWMLREDGSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEE
SAIEELARDYNANWMSAVEMLDDDIYIGAENNYNLFTVRKNSDAATDEERGRLEVVGEYH
LGEFVNRLRHGSLVMRLPDSEMGQIPTVIFGTINGVIGIIASLPHDQYVFFEKLQSTLVK
FIKGVGNLSHEQWRSFHNDKRTSEARNFLDGDLIESFLDLSRSKMEEVSKGMGVPVEELS
KRVEELTRLH
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtctggaactacgtcgtcacggcgcacaagcccaccagcgtcacccactcctgc
gtcggcaacttcaccggccccagccagctcaacctcatcgtcgcgaaatgcacccgtatc
gagatccacttgcttactcctcagggccttcagcctatgattgatgttcccatatacggc
agaattgcaacgcttgagctcttccgcccacataatgagactcaggacttcctttttatt
gcgactgaaagatacaaattctgtgttctgcagtgggatggagaaaaatcagaacttctc
actagagcgatgggagatgtttctgatcgcattggtcgccctacggacaatggacagatt
gggatcattgaccctgactgtagacttattggtcttcacctctacgatgggttgtttaag
gttataccatttgacaacaaagggcagctgaaggaagctttcaatatcaggcttgaagaa
cttcaagttttggacatcaaattcctgtatggctgtgttaaacctacaatagttgtcctc
taccaggataacaaagatgcaagacatgttaagacatatgaagttgcattgaaggacaaa
gactttgttgagggtccttggtcgcagaacaatttagacaatggtgctggtctgttaata
cctgtaccagctccacttggtggtgtcataattattggtgaggagacaatagtttactgc
aacgccaatgctacatttagagctataccaatcaaacagtcaatcataagagcttacgga
cgggttgacccagacggttcacgttatttacttggtgataatacaggcatattgcattta
cttgtccttacccatgaacgagaaagggtaactggtctgaaaatcgaatgcttgggagag
acttcaattgcatcatcaatatcatatcttgacaatggcgttgtctatgttggttctcga
tttggtgattcacagcttgtaaaactgaatctccaagctgatgccaatggttcatatgtt
gaagttcttgaacgatatgtgaaccttggacccattgtggacttctgtgtggttgacctt
gataggcaggggcaaggtcaggttgtcacttgttcaggtgcatttaaagatggttccctt
agggtggttcggaatgggattggtatcaatgagcaggcttcagtagaactccaaggaatc
aagggtttatggtcattgaaatcttccttcaatgatccatatgacatgtatcttgttgtg
agctttataagcgagacaagattcttggctatgaacatggaagatgagttagaagaaact
gagatagaaggctttgatgcacagactcagactttgttttgccaaaatgctatcagtgat
ctgcttatacaggttactgctaattctgttcgtctggttagttgtacctctcgggagcta
gtggatcaatggaatgcaccagaaggattttcagtcaatgttgcatcagctaatgccagt
caggttttgttggcaacaggtggtggccatcttgtttacctagaaattagggattctaag
ctggttgaagtgaaacatatacagttagaacatgagatttcctgtgttgatttgaaccca
ataggggataatccacagtatagctctctggctgctgttgggatgtggactgatataagt
gttagaatactttcacttccagaccttgaattaatcaggaaggaaaatttaggtggagaa
atcgttcctcggtctgttctgctttgtaccttggaaggggtgtcatatttgctctgtgct
cttggagatggtcatctgttcagttttctgttgaatgcaagtacgggtgaattaactgat
agaaagaaggtttctcttggcacccaaccaataagccttcgtacattctcatcaaagggt
acaacccatgtgtttgcttcatcagatagaccaactgtcatttatagcagcaataagaag
ttgctgtatagcaatgtcaatttgaaggaagtcaaccatatgtgtcctttcaatacagct
gctattcctgacagccttgcaattgccaaagaaggtgaactctcaattggaaccatagat
gacatccagaagcttcacatccgtacaatccccttgaatgaacaagcacgtcgcatttgc
catcaagaacagtcgaggacgctagcattctgcagcttcaagcacaaccagactagtata
gaggaaagcgagacacattttgttcgtcttttagatcatcagacttttgagtttctgtca
atttatcagctcgatcaatatgagcatggttgctccatcattagttgctcattctcagat
gacaataatgtttattattgtgtgggaacagcatatgttttaccggaggaaaatgaacca
acaaagggccggatccttgtatttgcagttgaagatggcagactgcaattaatcgtagag
aaagaaactaaaggagctgtctattcgctaaatgcattcaatgggaaattgttggcagct
atcaaccagaagattcaactatataagtggatgctacgggaggatggttcacatgagctg
cagtcggagtgtggccatcatgggcacatattggctttatacactcagactcgtggcgat
ttcattgtagttggagacttgatgaaatcgatatccttgcttgtgtacaagcatgaggaa
agtgcgattgaagagcttgctagggattacaatgcaaactggatgagtgcagttgagatg
cttgatgatgacatctatattggagcagagaataactacaaccttttcactgtgcgcaag
aacagtgatgcagccacagatgaagagaggggcaggctcgaggttgttggagagtaccat
cttggagagtttgtgaatagactccggcatggttcgctcgtaatgcgccttccagactca
gagatgggccagatcccgacggtcatctttggcacaatcaatggagttattggcattatt
gcatcccttccacatgaccagtatgtattttttgagaagctccagtccactcttgtgaag
ttcataaagggtgttggcaatctgagccacgagcaatggcggtcattccacaacgacaag
aggacgtcggaggcccgtaatttcctggatggtgacctgatcgagtcattccttgaccta
agcagaagcaagatggaggaggtgtccaaggggatgggggttcccgtagaggagctttcc
aagagggtggaggagctgacgagattgcactag
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