KEGG   Oryza brachyantha (malo sina): 102699310
Entry
102699310         CDS       T02995                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03420  Nucleotide excision repair
obr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102699310
  09124 Replication and repair
   03420 Nucleotide excision repair
    102699310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:obr04121]
    102699310
   03400 DNA repair and recombination proteins [BR:obr03400]
    102699310
Ubiquitin system [BR:obr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     102699310
DNA repair and recombination proteins [BR:obr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      102699310
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      102699310
SSDB
Motif
Pfam: Beta-prop_RSE1_1st CPSF_A Beta-prop_RSE1_2nd
Other DBs
NCBI-GeneID: 102699310
NCBI-ProteinID: XP_006654871
LinkDB
Position
5:19960081..19968605
AA seq 1090 aa
MSVWNYVVTAHKPTSVTHSCVGNFTGPSQLNLIVAKCTRIEIHLLTPQGLQPMIDVPIYG
RIATLELFRPHNETQDFLFIATERYKFCVLQWDGEKSELLTRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCVKPTIVVL
YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGAGLLIPVPAPLGGVIIIGEETIVYC
NANATFRAIPIKQSIIRAYGRVDPDGSRYLLGDNTGILHLLVLTHERERVTGLKIECLGE
TSIASSISYLDNGVVYVGSRFGDSQLVKLNLQADANGSYVEVLERYVNLGPIVDFCVVDL
DRQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGLWSLKSSFNDPYDMYLVV
SFISETRFLAMNMEDELEETEIEGFDAQTQTLFCQNAISDLLIQVTANSVRLVSCTSREL
VDQWNAPEGFSVNVASANASQVLLATGGGHLVYLEIRDSKLVEVKHIQLEHEISCVDLNP
IGDNPQYSSLAAVGMWTDISVRILSLPDLELIRKENLGGEIVPRSVLLCTLEGVSYLLCA
LGDGHLFSFLLNASTGELTDRKKVSLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKK
LLYSNVNLKEVNHMCPFNTAAIPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRIC
HQEQSRTLAFCSFKHNQTSIEESETHFVRLLDHQTFEFLSIYQLDQYEHGCSIISCSFSD
DNNVYYCVGTAYVLPEENEPTKGRILVFAVEDGRLQLIVEKETKGAVYSLNAFNGKLLAA
INQKIQLYKWMLREDGSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEE
SAIEELARDYNANWMSAVEMLDDDIYIGAENNYNLFTVRKNSDAATDEERGRLEVVGEYH
LGEFVNRLRHGSLVMRLPDSEMGQIPTVIFGTINGVIGIIASLPHDQYVFFEKLQSTLVK
FIKGVGNLSHEQWRSFHNDKRTSEARNFLDGDLIESFLDLSRSKMEEVSKGMGVPVEELS
KRVEELTRLH
NT seq 3273 nt   +upstreamnt  +downstreamnt
atgagcgtctggaactacgtcgtcacggcgcacaagcccaccagcgtcacccactcctgc
gtcggcaacttcaccggccccagccagctcaacctcatcgtcgcgaaatgcacccgtatc
gagatccacttgcttactcctcagggccttcagcctatgattgatgttcccatatacggc
agaattgcaacgcttgagctcttccgcccacataatgagactcaggacttcctttttatt
gcgactgaaagatacaaattctgtgttctgcagtgggatggagaaaaatcagaacttctc
actagagcgatgggagatgtttctgatcgcattggtcgccctacggacaatggacagatt
gggatcattgaccctgactgtagacttattggtcttcacctctacgatgggttgtttaag
gttataccatttgacaacaaagggcagctgaaggaagctttcaatatcaggcttgaagaa
cttcaagttttggacatcaaattcctgtatggctgtgttaaacctacaatagttgtcctc
taccaggataacaaagatgcaagacatgttaagacatatgaagttgcattgaaggacaaa
gactttgttgagggtccttggtcgcagaacaatttagacaatggtgctggtctgttaata
cctgtaccagctccacttggtggtgtcataattattggtgaggagacaatagtttactgc
aacgccaatgctacatttagagctataccaatcaaacagtcaatcataagagcttacgga
cgggttgacccagacggttcacgttatttacttggtgataatacaggcatattgcattta
cttgtccttacccatgaacgagaaagggtaactggtctgaaaatcgaatgcttgggagag
acttcaattgcatcatcaatatcatatcttgacaatggcgttgtctatgttggttctcga
tttggtgattcacagcttgtaaaactgaatctccaagctgatgccaatggttcatatgtt
gaagttcttgaacgatatgtgaaccttggacccattgtggacttctgtgtggttgacctt
gataggcaggggcaaggtcaggttgtcacttgttcaggtgcatttaaagatggttccctt
agggtggttcggaatgggattggtatcaatgagcaggcttcagtagaactccaaggaatc
aagggtttatggtcattgaaatcttccttcaatgatccatatgacatgtatcttgttgtg
agctttataagcgagacaagattcttggctatgaacatggaagatgagttagaagaaact
gagatagaaggctttgatgcacagactcagactttgttttgccaaaatgctatcagtgat
ctgcttatacaggttactgctaattctgttcgtctggttagttgtacctctcgggagcta
gtggatcaatggaatgcaccagaaggattttcagtcaatgttgcatcagctaatgccagt
caggttttgttggcaacaggtggtggccatcttgtttacctagaaattagggattctaag
ctggttgaagtgaaacatatacagttagaacatgagatttcctgtgttgatttgaaccca
ataggggataatccacagtatagctctctggctgctgttgggatgtggactgatataagt
gttagaatactttcacttccagaccttgaattaatcaggaaggaaaatttaggtggagaa
atcgttcctcggtctgttctgctttgtaccttggaaggggtgtcatatttgctctgtgct
cttggagatggtcatctgttcagttttctgttgaatgcaagtacgggtgaattaactgat
agaaagaaggtttctcttggcacccaaccaataagccttcgtacattctcatcaaagggt
acaacccatgtgtttgcttcatcagatagaccaactgtcatttatagcagcaataagaag
ttgctgtatagcaatgtcaatttgaaggaagtcaaccatatgtgtcctttcaatacagct
gctattcctgacagccttgcaattgccaaagaaggtgaactctcaattggaaccatagat
gacatccagaagcttcacatccgtacaatccccttgaatgaacaagcacgtcgcatttgc
catcaagaacagtcgaggacgctagcattctgcagcttcaagcacaaccagactagtata
gaggaaagcgagacacattttgttcgtcttttagatcatcagacttttgagtttctgtca
atttatcagctcgatcaatatgagcatggttgctccatcattagttgctcattctcagat
gacaataatgtttattattgtgtgggaacagcatatgttttaccggaggaaaatgaacca
acaaagggccggatccttgtatttgcagttgaagatggcagactgcaattaatcgtagag
aaagaaactaaaggagctgtctattcgctaaatgcattcaatgggaaattgttggcagct
atcaaccagaagattcaactatataagtggatgctacgggaggatggttcacatgagctg
cagtcggagtgtggccatcatgggcacatattggctttatacactcagactcgtggcgat
ttcattgtagttggagacttgatgaaatcgatatccttgcttgtgtacaagcatgaggaa
agtgcgattgaagagcttgctagggattacaatgcaaactggatgagtgcagttgagatg
cttgatgatgacatctatattggagcagagaataactacaaccttttcactgtgcgcaag
aacagtgatgcagccacagatgaagagaggggcaggctcgaggttgttggagagtaccat
cttggagagtttgtgaatagactccggcatggttcgctcgtaatgcgccttccagactca
gagatgggccagatcccgacggtcatctttggcacaatcaatggagttattggcattatt
gcatcccttccacatgaccagtatgtattttttgagaagctccagtccactcttgtgaag
ttcataaagggtgttggcaatctgagccacgagcaatggcggtcattccacaacgacaag
aggacgtcggaggcccgtaatttcctggatggtgacctgatcgagtcattccttgaccta
agcagaagcaagatggaggaggtgtccaaggggatgggggttcccgtagaggagctttcc
aagagggtggaggagctgacgagattgcactag

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