KEGG   Oryza brachyantha (malo sina): 102699486
Entry
102699486         CDS       T02995                                 
Name
(RefSeq) tubulin alpha-1 chain
  KO
K07374  tubulin alpha
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr04145  Phagosome
obr04517  IgSF CAM signaling
obr04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:obr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    102699486
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102699486
  09142 Cell motility
   04814 Motor proteins
    102699486
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obr03019]
    102699486
   03036 Chromosome and associated proteins [BR:obr03036]
    102699486
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:obr04812]
    102699486
   04147 Exosome [BR:obr04147]
    102699486
Messenger RNA biogenesis [BR:obr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     102699486
Chromosome and associated proteins [BR:obr03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     102699486
Cytoskeleton proteins [BR:obr04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    102699486
Exosome [BR:obr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102699486
  Exosomal proteins of other body fluids (saliva and urine)
   102699486
  Exosomal proteins of colorectal cancer cells
   102699486
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 102699486
NCBI-ProteinID: XP_006650524
LinkDB
Position
3:24231014..24233809
AA seq 451 aa
MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDKTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGGYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
SIVPGGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEFDEGEDGDEGDEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagggagtgcatctcgatccacatcggccaggccggtatccaggtcggaaacgcgtgc
tgggagctctactgcctcgagcatggcatccaggctgatggtcagatgcccagtgacaag
accgttggtggaggtgacgatgcattcaacaccttcttcagcgagactggtgctgggaag
catgttccccgtgctgtctttgttgatcttgagcctactgtcattgatgaggtgaggact
ggtggctaccgccagctcttccaccctgagcagctcatcagtggcaaggaggatgcagcc
aacaactttgcccgtggtcactacaccattggcaaggagattgttgatctgtgccttgac
cgtatcaggaagcttgctgacaactgcactggtctccaaggtttccttgtgttcaatgct
gttggaggtggaactggctctggtcttggttccctcctcctggagcgcctctctgttgac
tatggcaagaagtccaagctcgggttcacagtgtacccatcccctcaggtctccacctct
gtggttgagccatacaacagtgtcctctccacccactccctccttgagcacactgatgtt
gctgtcctccttgataacgaggccatctatgatatatgccgccgctcccttgacatcgag
cgcccaacctacaccaacctcaacaggcttgtgtctcaggttatctcatccttgaccgcc
tccctgaggtttgatggtgctctcaatgtggatgtcaacgagttccaaaccaaccttgtg
ccctacccgaggatccacttcatgctttcatcttacgccccagtgatctctgccgagaag
gcctaccatgagcagctctccgtcgctgaaatcaccaacagcgccttcgagccatcctcc
atgatggccaagtgcgaccctcgccacggcaagtacatggcatgctgcctcatgtaccgt
ggtgatgtggtccccaaggacgtgaacgccgctgtcgccaccatcaagaccaagcgcacc
atccagttcgtcgactggtgcccgaccgggttcaagtgcggcatcaactaccagccgccc
agcatcgtccccggcggcgacctggccaaggtgcagagggccgtgtgcatgatctccaac
tccaccagcgtcgtcgaggtcttctcccgcattgaccacaagttcgacctcatgtacgcc
aagcgcgccttcgtccactggtacgtgggtgagggcatggaggagggcgagttctccgag
gctcgcgaggacctggccgcgctcgagaaggactatgaggaggtcggcgctgagttcgac
gagggtgaggacggcgatgagggcgacgagtactag

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