Oryza brachyantha (malo sina): 102699563
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Entry
102699563 CDS
T02995
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obr03036
]
102699563
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
obr00535
]
102699563
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
102699563
Meiosis-specific proteins
Cohesin complex and associated proteins
102699563
Proteoglycans [BR:
obr00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
102699563
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
MscS_porin
AAA_29
Motif
Other DBs
NCBI-GeneID:
102699563
NCBI-ProteinID:
XP_006646842
UniProt:
J3L9D5
LinkDB
All DBs
Position
2:complement(1330495..1340676)
Genome browser
AA seq
1204 aa
AA seq
DB search
MYIKKVVIEGFKSYREEISTEPFSPKVNVVVGANGSGKSNFFHAIRFVLSDMFQNLRSED
RGALLHEGAGHSVVSAFVEIVFDNSDNRIPVDKEEVRLRRTVASKKDEYYLDGKHVSKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEDRRRESLKIMQ
ETANKRKQIDQVVHYLEERLRELDEEKEELKKYQQLDKQRRSLEYTILDHELNEARNELA
SMDDNRRNISERMSHADNEVVDVREKIKSFDKEIKYSTKGINDTKAQKEGVEKKRTEALK
VVAQIELDLRDIKDRILNEKRAKDEAARDLQSVRMESEKSKSELAEISKVHQAKLKEEEE
ISKSIMDREKRLSILYQKQGRATQFANKAARDKWLQKEIDDLERVLSSNRRQEGLLQEEI
QKLKDEINNLNSYIESRKSESSKLESALAKKHNDYNDLRKQRDELQEERKSFWKEEADVT
AEIDRLKDDLVKAQKSLDHATPGDIRRGLNSVSRIIRDHGITGVFGPVLELVDCEEKFFT
AVEVTAGNSLFHVVVENDDISTRIIQVLTREKGGRVTFIPLNRVKVPDVSCPHSPDFVPL
LKKLKYRADHRRAFEQVFGRTVICRDLETATKVARGNGLDCITLDGDQVARKGGMTGGFY
DSRRSKLKFVKIIRDNKTAIEKKAAHLENVGSKLRDIDKKITDLVTKQQQMDAERDHAKS
ELEQFKVDIASAMKQMGSLDKALGKKEKSLDNIRNQIEQIQSGIAMKNDEMGTELIDQLT
SEERDLLSRLNPEITELKEKFLLCKNSRIEIETRKEELETNLSTNLMRRQKELEAIISSA
DSKTLPLEAESKEQELKSSKRSLDELTAMLKANVDAINNFTRKMEELKRQRDDLKALEAN
LEQTVQDGAKDLEQLMSNRSMHLAKQEECMKKIRDLGSLPADAFETYKRKNKKQLQKMLY
ECNEQLQQFSHVNKKALDQYVNFTEQREQLQRRRAELDAGDQKIRELISVLDQRKDESIE
RTFKGVARHFCEVFSELVQGGHGHLVMMKKKDGDAGDDDNDEDGPREPDPEGRIEKYIGV
KVKVSFTGKGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADMADTQFIATTFRPEIVKVADKIYGVTHKNRVSYINVVSKEQALDFIEHDQT
HNAS
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaagaaggttgtgatagaagggtttaagagctacagggaggagatctcaacg
gaacctttcagcccaaaagttaatgtagttgtcggcgcaaatggatctggcaaatcaaac
ttcttccatgctatacggtttgtcctcagtgacatgtttcagaacttgcgcagtgaagac
aggggtgctcttcttcatgaaggtgctgggcactcggttgtctcggcttttgtggagata
gtgtttgataattcagacaaccgtattccagttgacaaagaggaggtacgcttgcgcagg
actgttgcttcaaagaaggatgaatactacttggatgggaagcatgtcagtaaaactgaa
gtcatgaatctgctagagagtgctggattttctcgctctaatccatactacgttgtccag
cagggaaagattgcatcccttaccctaatgaaagattctgaacgactggatctcctcaaa
gagatcggtggtacgcgtgtttatgaagacagacggcgtgagagtttgaaaatcatgcag
gaaacagccaacaaaagaaagcagattgatcaagttgtccactacttggaggaaaggctg
agagaacttgatgaagagaaagaagaactgaagaaataccagcagttggacaaacaaaga
agatcactcgagtacactatattggaccatgaactaaatgaggctaggaacgaattagct
tcaatggatgataaccgaagaaatatttctgaaagaatgtcccatgcggataatgaagtg
gtagatgtacgtgagaagatcaagagttttgacaaagaaataaaatactcaaccaagggg
ataaatgataccaaggctcaaaaggaaggtgtagagaagaaacgtacagaagcactgaag
gttgttgctcagattgagcttgatttgagagacataaaagacagaatcttgaacgagaaa
cgtgcaaaggatgaagctgcaagggatttacaaagcgtgaggatggagagtgaaaagtca
aagtctgaattagctgaaattagtaaggtgcatcaagccaaactgaaggaagaggaagaa
atatcaaaaagcataatggaccgtgagaagcggttaagtatattgtaccaaaagcagggg
agggcaacccaatttgcaaacaaagctgccagggataagtggcttcaaaaggaaattgat
gatcttgagcgtgtactttcatcgaatcgaagacaggaaggtttacttcaagaagaaatc
cagaagcttaaagatgaaattaataacttgaacagctacattgagtctcggaaaagtgaa
tcaagcaaattagagtctgcacttgcaaagaagcacaatgactacaatgacttgaggaaa
cagcgagacgagcttcaggaagaaaggaaatcattttggaaggaggaagctgatgtgaca
gctgagattgataggctaaaggatgatcttgtgaaggcacagaagagtttggaccatgca
acacctggggatatcagaagaggcttgaattctgttagcagaatcataagggaccatggt
attacaggagtttttggtcctgtattagagctggttgattgtgaagagaagtttttcacc
gcagttgaggttactgcagggaatagcttgttccatgtggttgttgagaatgacgacata
tcaacaagaatcattcaagttttgactcgagaaaaaggtggacgggtgacatttatacca
ctgaatagagtgaaggttccagatgttagttgtccacatagtcctgattttgttccattg
ttaaagaaactaaaatatcgggccgatcatcgccgtgcttttgaacaggtttttggcagg
acagtaatatgccgagacctggaaactgcaaccaaagttgcacgtggtaacgggctagat
tgcatcacacttgatggtgatcaggttgccagaaaaggtggtatgactggaggtttttat
gactctagacgttcaaaactgaagtttgtgaaaataattagggacaataaaactgcaatt
gagaaaaaggcagcacatctggagaatgttggaagcaagctaagagatatagataagaaa
attacagatttagttactaaacagcagcaaatggatgctgaacgtgaccatgccaaatca
gagttggaacaatttaaggtcgacattgctagtgctatgaagcaaatgggatcacttgac
aaggcccttggaaagaaggaaaaatcacttgacaacatacggaaccaaattgagcaaatc
caatctggcattgcaatgaaaaatgatgaaatgggcactgaacttattgatcagttaact
tcagaagaacgagatcttctttcacgattgaatcccgaaattactgaactaaaggagaag
tttctcttatgtaaaaacagtcgcattgagattgaaacaaggaaagaagaattggaaacc
aatctatcaactaatcttatgaggcgccagaaagagcttgaagcaataatttcatctgca
gactctaaaaccttgcctctggaagctgaatcaaaagagcaagaattaaaaagttcaaag
aggagtctggatgaattgactgcaatgttgaaggctaatgttgatgctataaataacttt
acgaggaagatggaggaactgaaaagacaaagggatgatctgaaggcacttgaagctaac
ctggagcagactgtacaagatggtgccaaggatttggaacagctcatgagcaacaggagt
atgcatttagctaagcaagaggagtgtatgaagaagatccgagacttgggctcattgcct
gcagatgcttttgaaacgtacaagcggaaaaataagaagcagctgcagaagatgctttac
gaatgcaatgagcaattgcagcagttcagtcatgtcaacaaaaaagctcttgaccagtat
gtgaacttcacggaacagcgtgaacaattacagagaagaagggctgaacttgatgctggt
gatcagaaaatcagagaactcatatcagttttagaccaaaggaaggatgaatcaattgag
cgtacatttaaaggagttgcgaggcacttctgtgaagtgttctctgagctagtgcagggt
ggtcatggacatctggttatgatgaagaaaaaggacggtgatgcaggcgatgatgataat
gacgaggatgggcctcgtgaaccagatcctgaagggaggatagagaagtacattggtgta
aaagtcaaggtttcctttactggcaagggagaaactcagtccatgaaacaattgtctggt
ggacagaagacagtggtggcgttgacactgatttttgctatccagcgttgtgatccagct
ccattctatctttttgatgagatcgatgctgctctggatccacagtacagaacagctgtt
ggcaatatgattcgccgtctagctgacatggctgacactcagtttatagcaacgactttc
cgaccagaaattgtaaaagttgctgataaaatatatggtgtgacacacaagaatagggtg
agctacatcaatgtggtatcaaaggagcaagctctggacttcattgagcatgaccagact
cataatgctagctga
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