Oryza brachyantha (malo sina): 102699679
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Entry
102699679 CDS
T02995
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102699679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102699679
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102699679
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
102699679
NCBI-ProteinID:
XP_006652810
UniProt:
J3M1C6
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All DBs
Position
4:complement(18333598..18337847)
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AA seq
328 aa
AA seq
DB search
MANLQPSIAIPPSYAGASPPSPSPIGGGGGGVGAGVGQPSKDRKMASAEQLVLDLCDPEL
RENALLELSKKRDIFQDLAPLLWHSFGTVGALLQEIVSIYPALSPPTLSPVASNRICNAL
ALLQCVASHPETRILFLNAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDTEV
ISFLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLA
NMVVSLAEQPSTRLLKHIIRCYLRLSDNPRACAALQSCLPDMLKDGTFNNCLRDDPTTRR
WLQQLLLNVTGGSMGGAPQPGLDHMMGI
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatctgcagccttcgattgcaatacccccctcctacgccggggcatcgccgcct
tcgccttctccgatcggcggcggcggcggcggcgtgggtgccggtgtgggacagccatcc
aaggacaggaagatggcgtcggcggaacagcttgtgctcgacctctgcgaccccgagctt
cgcgagaacgccctcctcgagctctcgaagaaaagagatatatttcaagatctggccccg
cttctttggcactcttttggaacagttggcgcacttcttcaggagattgtgtcaatttac
cctgcactttcacccccaacattgtcaccagttgcgtcgaaccgaatctgcaatgcactt
gcgcttctgcagtgtgtcgcatctcaccctgagacgaggatccttttcttaaatgctcac
attccactgtacctgtacccattcttgaatactaccagcaagacaagaccttttgaatac
ctgcgactcactagcttgggtgtcatcggtgcacttgttaaggttgatgatactgaagtt
atcagttttctgttgcaaactgaaataattcctctgtgcttgcgtactatggagatggga
agcgagctgtcaaaaactgtggccaccttcattgttcagaagattctgcttgatgatgtt
ggactgcgctacatttgtgccactgctgagcgtttctttgctgtaggcagtgttttagct
aacatggtggtttcacttgctgagcagccttcaacaaggctgctgaagcacattatccga
tgttaccttaggctgtcagacaatcccagggcatgtgctgccctacaaagttgcctccct
gacatgctgaaggatgggacattcaataactgtcttagggatgatcctacaacaaggcgc
tggctccagcaattgctgcttaacgtgacaggcggaagcatgggaggagctcctcagcca
ggtctggatcacatgatggggatatag
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