Oryza brachyantha (malo sina): 102699683
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Entry
102699683 CDS
T02995
Name
(RefSeq) LOW QUALITY PROTEIN: DNA replication ATP-dependent helicase/nuclease JHS1
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102699683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obr03032
]
102699683
Enzymes [BR:
obr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102699683
DNA replication proteins [BR:
obr03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
102699683
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
102699683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
UvrD-helicase
Dna2_Rift
Viral_helicase1
nSTAND3
ResIII
PhoH
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
102699683
NCBI-ProteinID:
XP_040379172
LinkDB
All DBs
Position
4:17236930..17247769
Genome browser
AA seq
1331 aa
AA seq
DB search
MSWSSRAKGIWELGVEIGCGPSYVGCQNPSAAIAESKVSWARSLTQTKSAGGRGSERGRR
RRAPRRSHRRRSRRSPPSLASSTSSSASPRPPPRTPSVRRPTSPRSLPXPPPPLIEEEPS
EVSPEVTKTLAPKRVRFSPGMLIKQSQDDGGGEVVTWKISPVNDRLRMVTSKQMTGMALH
PCSNNEKHSSIESTKKWHSSLLGMSRCTASARNLDMCGTAPGGCEGVEDTQSPFRTPPSL
SYRCSEVASDGGPEQLGVGQHKKTLLDLLDQVEDAIMEEELPADVENKGQQLINGDTSNI
SSPIANSDINLPSQKPLDAPPFDSFLVLEVSEKRKGDNLPCDRYPVKVLRLLNEHRGKEY
AVYLCDEWFHSLIGPGDTVSVIGEFTDQGICVVDRDKNLVVVHPELLISGTRVASSFHCP
RRSVLDDRLKSNEYSTSALIGTLLHQVFQAGLLEDIPSRQFLEQQAKEVLLKNIESLYAC
GASESNTLKMLFEAIPKILNWYKCFMKVSTCTSVDFGQTEGQKTIGVVEVMDIEEMAWAP
RYGLKGIIDASVRTRVSCNGSSYDRVMPLEFKTGKGTSGLTAVEHNAQVILYTLLMTERY
LSKDIDLGLLYYLHTDQTLGIKVKRSNLIGLIMRRNELATEILKASVSQCFPPMIQSPST
CNGCRHLVSCTIYHKVHGGNATSSGLGDLFDNLVNHLTVAHHTFLKHWDRLIDLEARASQ
VKKKDIFQPHHSNPGRRNSAPCYFVLDIKNEHSIDSSGKSKRYIYTFLRQKMQSETADQP
DAQVESVDFSLKCGDSVVLSTQSGRIAVANGYIRDLSRSHITVSLPRRLRLPGSNSLLEQ
EDLQCELWRIDKDESISSFATMRLNLIQLFAQNPQNSHLRKLIVDLEAPRFDSGGLLSQD
PALSYIRSLPNLNNDQQRSLHKILAAKDYALILGMPGTGKTYTMVHAVKSLLMRGESILL
TSYTNSAIDNLLMKLKTEGVDFLRIGRHEAVHPDIKGHCLSTTDAQSVDAIKARMEQVQV
VGVTCLGIYHPLLAHKKFDTCIMDEAGQITLPVSLGPLMLATKFVLVGDHYQLPPLVQSS
EARENGMGVSLFWRLSEAHPQAISALRCQYRMSSGIMELSNSLIYGDRLSCGSLEIANSK
LKLSGREPVHLKLKEILNPDRAVVFANTDEVPALEAKEHRTVNNPTEAFIVSWITNELLK
RGVAQDGIGIITPYNAQANIIQQHVDALVEVHTIDKYQGRDKECIIVSFVRSSGNSRASG
SSLLGDWHRINVVLTRAKKKLIMVGSAATLSTIPLLRLTVEMVAARGGQLDLTNKDVQSI
RELKSSRLNVQ
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgagttggtcatctcgagcgaaaggcatttgggaattgggagtagagataggctgtggg
ccgtcgtacgtgggctgccagaacccatcagcagcaattgctgagagtaaggtttcatgg
gccagatctctcacgcagaccaaatcagccggcggaagaggaagcgaacgggggcggcgg
cggcgggctcctcgaagaagccaccggcgtcgcagccgtcgcagcccgccaagtttggca
tcctccacttcttcgagcgccagtcccaggcctcctcccagaactccaagtgtcagaagg
ccgacgagcccccgcagcctcccgncgcccccgccgccgctcatcgaggaggagccgtcg
gaggtgtcgccggaggtcaccaagaccctggcgccgaagcgggtcaggttttctcctgga
atgctgattaagcaaagccaggacgatgggggtggggaggttgtgacttggaagatctcg
ccggttaacgatcgcctgcgcatggtcacttcgaagcagatgactggtatggcgcttcat
ccgtgctcgaacaacgagaaacattcatcgatcgagtctacaaagaaatggcattcatca
ttgctgggaatgtcaagatgtactgcttcagcacgcaatttggatatgtgtggaactgct
ccaggtggctgtgagggtgtggaggacacccagagcccatttcggactcctccatcactg
tcctataggtgcagtgaggtggcttctgatggaggacctgagcagttgggggtagggcag
cacaaaaagacactacttgatcttttagatcaagtggaagatgcaatcatggaagaagaa
ttaccagctgatgttgagaataaaggacaacaactcataaacggtgataccagcaatatt
agttctcctattgctaatagtgatataaatttgccctcccagaagccccttgatgctcca
ccattcgatagttttttggtgttggaggtgtcagaaaagcgcaaaggtgataacttgcca
tgtgatcgctatcctgttaaggttttacgtctgctgaacgagcaccgtgggaaagagtat
gcagtctatttgtgcgatgagtggttccatagccttattgggccaggcgacacagtaagt
gtcatcggagaattcactgaccaaggaatatgcgttgttgatcgtgacaaaaatcttgtt
gtagtgcatccagaattactcatttctggaacacgggttgcttctagtttccattgtcca
agaagatctgttcttgatgatagactaaaaagcaatgaatattcaacaagtgctttgatt
ggtactttgctgcatcaagtattccaggcagggctacttgaagacattccttcacggcaa
ttcttagagcagcaagcaaaagaagttcttttgaaaaacattgagagtttgtacgcatgt
ggagccagtgaaagtaacacgctgaaaatgctttttgaagcaatccccaaaatattgaac
tggtacaagtgctttatgaaggtatcaacatgtaccagtgtagattttggtcaaactgaa
ggacagaagactattggagtggtggaggtaatggatattgaggagatggcatgggcacca
agatatggtttgaaagggattattgacgcttctgttagaacaagggtttcatgcaatggt
agttcatatgacagagtaatgccactggagttcaaaactggtaaaggaaccagtggtctg
acagctgtggaacacaatgcccaagtgatactgtacacactattgatgacagagagatac
ttgagcaaggatattgacttgggacttctgtattatcttcacacagatcaaacattgggg
atcaaagtcaagaggtctaatttgattggattaataatgcgtcgcaacgagcttgccact
gagatcctgaaggcatcggtttcacagtgtttccccccaatgatccagagtccatcaaca
tgtaatggatgccgacacctggtttcatgcaccatatatcacaaggttcatggaggcaat
gctacaagtagtggtcttggcgatctatttgacaacctcgtgaatcacttgacagttgca
catcatacctttcttaaacattgggacagattgattgatcttgaagctagagcttctcag
gtcaagaagaaggacattttccagccacatcattcaaatcctgggaggaggaattccgcc
ccatgttattttgtccttgatataaaaaatgaacattcaatagattcatcaggcaaaagc
aaaagatacatatatactttcctgcgccagaagatgcagtctgaaacagctgaccagcca
gacgcacaggttgaaagtgtagattttagcctcaaatgtggcgattctgtggttctcagc
acacaatctgggcggatagcagttgcaaatggatacataagggatctcagccgttcccat
attacggtctcattgccacggcgtctgagacttccaggaagtaattccttgttagagcag
gaagatctccaatgtgaattgtggcggatagacaaagatgagtctatttcttcatttgct
acaatgaggcttaatcttatccaactatttgctcagaatccacagaactctcacttaagg
aagttgattgttgaccttgaggctcccagatttgatagtggaggtctgcttagccaagat
ccggcattatcatatatacggtcactaccaaatttgaacaatgaccaacagaggtcactg
cataaaattctagcagcaaaagattatgctcttattctaggaatgcctggcacaggcaaa
acatatacgatggtgcatgctgtgaagtcattattgatgagaggggaatctattttgcta
acctcatatactaattcagctattgataatttgcttatgaagttgaagactgagggtgtg
gattttcttcgaattgggaggcatgaagctgtgcatcctgatatcaagggccactgtttg
tcaacaacagatgcacaatcagtagatgctatcaaagcaagaatggagcaagtgcaagtt
gttggagtcacttgtttgggaatatatcaccctttactagcgcacaagaagttcgacaca
tgtatcatggatgaagcaggccagatcacattaccggtttcactgggacctttgatgctt
gcaacaaagtttgttctagtaggagaccattatcagcttcctccactcgttcagagctct
gaagctcgagagaatggtatgggcgtcagcttgttttggaggttatcagaagcacatcct
caagcgatttcagcactgcgatgccagtaccgaatgtcatctggtattatggagctctca
aattcattgatttacggcgataggttatcctgtggttcgttggaaattgcaaattccaag
ctcaagctttctggcagagaaccagtgcacttgaagctgaaagagatcttgaaccctgat
agggctgtcgtctttgcaaacacagatgaagtaccggcactcgaggccaaggaacataga
accgtgaacaatcctacagaagcattcattgtttcatggatcaccaacgaattgctaaag
agaggagtagctcaagatgggattggtataatcactccatataatgcccaagcaaatatc
attcagcaacatgtagatgctttggttgaggttcatacaattgacaaataccaggggagg
gataaagaatgtattatagtatcttttgtacgatccagtggaaattcaagggctagtggt
tcgtctttgcttggtgattggcacaggatcaatgttgtcttgacacgtgcaaagaagaag
cttatcatggtgggatccgctgcaaccctttcaacgatcccattgttgagacttacggtt
gagatggtagctgcgcgtggtggtcagttagatctgacaaataaggatgtgcagtcaatt
cgagagctaaaaagctctcgactgaatgtacaatag
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