Oryza brachyantha (malo sina): 102699850
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Entry
102699850 CDS
T02995
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102699850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102699850
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102699850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Roquin_1_2-like_ROQ
Motif
Other DBs
NCBI-GeneID:
102699850
NCBI-ProteinID:
XP_040378419
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All DBs
Position
3:complement(26769941..26775180)
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AA seq
329 aa
AA seq
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MANLPPSLSIGAASFAAPSPPPPSPGASSSSSSAPGAAAAAKDRKMASAEQLVLDLCDPE
LRENALLDLSKKREIFQDLAPLLWHSYGTIAALLQEIVSIYPSLSPPTLSPGASNRVCNA
LALLQCVASHSDTRIPFLTAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDSE
VIGFLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVASVL
SQMVQALAEQPSPRLLKHIIRCYLRLSENSRACTALNSCLPTALKDGTLNNFLQDDHVTR
RWLQQLLHNMTMAGMGGAPHGGLDHIMGM
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatctgccgccgtccctctccatcggcgccgcctccttcgccgcgccctcgccg
cccccgccgtcgcccggcgcgtcgtcgtcgtcgtcgtcggcccccggggccgccgccgcc
gccaaggaccggaagatggcgtccgcggagcagctcgtgctcgacctctgcgaccccgag
ctgcgggagaacgccctcctcgacctctccaagaagcgagagatttttcaggatcttgct
ccactcctatggcattcctatggaacaattgctgcactactccaggagattgtatcaatc
tatccatcactttcacccccaacattatcgccaggggcatcaaaccgtgtctgcaatgca
cttgcacttcttcagtgtgttgcatcacacagtgacacgaggattcctttcttgactgct
cacattccactgtatctgtaccctttcttgaatactactagcaagacaaggccttttgaa
tacttgaggcttaccagcttgggtgtgattggtgcacttgtgaaggttgatgattctgaa
gtcattgggtttctgctgcaaactgaaataattcctctctgtctgcgtactatggagatg
ggtagtgaactttcaaaaacggttgccacctttattgttcaaaagattctgcttgatgac
gttgggcttcgctacatatgtgctaccgctgaacgtttctttgccgtagccagtgttctg
tcacagatggttcaggcacttgccgaacaaccttctccaagactactgaagcacataatt
cgttgttaccttaggctgtcagaaaacagcagggcatgtacagccctcaacagttgcctc
cccaccgcgctgaaagatgggaccctcaacaacttccttcaggatgatcatgtcacaagg
cgatggctccagcagctgctgcacaacatgactatggctggcatgggaggagctcctcat
gggggcctggatcacatcatggggatgtga
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