Oryza brachyantha (malo sina): 102700030
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Entry
102700030 CDS
T02995
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
102700030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obr04131
]
102700030
03029 Mitochondrial biogenesis [BR:
obr03029
]
102700030
Membrane trafficking [BR:
obr04131
]
Autophagy
Autophagosome formation proteins
ULK complex
102700030
Atg1 complex
102700030
Mitochondrial biogenesis [BR:
obr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
102700030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
102700030
NCBI-ProteinID:
XP_040377437
LinkDB
All DBs
Position
2:complement(19320564..19324807)
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AA seq
536 aa
AA seq
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MATLSDSAGGGGGRAGAELMVPQFHLKALHAILAVRAPRPPATAPAPAAASFRRRDRWFH
LPLHSPPPPAAAEHLPEPSAGEPLVVDVYLTPSGGGGAEEVVERWTVSCEPWPAGARAAA
AAGEGLAVNRAYKRCITLLRSVYTALRILPAYRVFRLLCASGQAYNYEMAFRVGSFAAPF
TRTEEAAMSTRRFAPVETQLGRLVVSVQYLPSLASFNLEICSLAPAMLITDYVGSPAADP
MRAFPTSLTEAARSAPTFPPRRPNSWASPVPWPHTPVQQAKFSPPTALSASPTPSPPTFA
GGYLQSRLSGETAPMIIPGSGRGPVHNRNMSDPVRGFMLPPPSPKSIRGEPGVHETPIES
GRTGIRMADLYANLPSVPKIKDSRDESGRFSGVFSSSGSPRLGFSRSSSRLSMQDDTDDL
DFPFAVDDVDMPDSRPGSSGGKDVGDQASSSSHKSQDAAVGYLVHMLKSARPLRDSSNSP
LTSRVESVEGATSSFMSRRTSDAFEELESFKEIKENLLARSRSRMQESLDKSLRHS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctgtcggactccgcgggcggcggcggcggccgggcgggcgcggagctgatg
gtgccgcagttccacctcaaggcgctgcacgcgatcctcgccgtgcgcgcgccgcggccg
cccgcgacagcgccagctcccgcggcggcgtcgttccggaggcgggacaggtggttccac
ctgccgctccactcgccgccgccgccggcggcagccgagcatctgccggagccgtccgcc
ggggagccgctcgtggtggacgtctacctgaccccgtcgggcggagggggagccgaggag
gtggtggagaggtggacggtgtcgtgcgagccgtggccggccggggcgagggcggccgcc
gccgccggggaggggctcgccgtgaacagggcgtacaagcggtgcatcacgctgctgagg
tcggtgtacaccgcgctccgcatcctccccgcctaccgcgtcttccgcctgctgtgcgcg
tccggccaggcgtacaactacgaaatggccttccgcgtcggctccttcgccgcgcccttc
acccgtaccgaggaggcagcgatgagcacccgccgcttcgcccccgtcgagacccagctc
ggtcgcctcgtcgtctccgttcagtatctcccttccctcgcctccttcaatctcgagatc
tgctccctcgcgccggccatgctcattaccgattacgttgggagcccggcagccgatcct
atgcgtgccttcccgacttctctcacggaggccgcccgctcggcgccaaccttcccgccc
cggcgcccgaacagctgggcgtcgccagttccctggccgcatacgcccgtgcagcaggcg
aaattctcaccgcccacggcattgtccgcgtctcccacgccttcccctccaacttttgcg
ggtggctacctgcaatcgcggctgagcggggagactgcaccgatgatcataccaggtagt
gggagaggccctgttcacaaccggaacatgtcggatcccgtcagggggttcatgctacct
ccaccttcaccgaagagcatccgaggcgagcctggggtgcatgagacgccgatagagtca
ggtcggacagggatcaggatggctgatctctacgctaatttgccttctgttcccaagatt
aaggatagtagggacgaatctggcagattctcaggtgttttctcctctagtggttcccca
cgccttgggttttcaagaagttcaagcagattgtcgatgcaagatgataccgatgattta
gattttccttttgcagtggatgatgttgatatgcctgattcccgaccagggagcagtggt
ggaaaggatgtgggggatcaagcgagctcatcatcccataaatcacaggatgctgctgtg
ggctaccttgtccacatgctgaagtctgcacggcccttgcgagattctagcaattcacct
cttacatcaagggttgaatctgttgaaggagccaccagttcttttatgtcccgtaggaca
tctgatgcattcgaggagcttgaatctttcaaagaaataaaggaaaatctgcttgcccgt
agtagatctaggatgcaagagtcattggacaagtccttgcgccattcttaa
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