KEGG   Oryza brachyantha (malo sina): 102700138
Entry
102700138         CDS       T02995                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102700138
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obr03019]
    102700138
   03041 Spliceosome [BR:obr03041]
    102700138
Messenger RNA biogenesis [BR:obr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     102700138
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102700138
Spliceosome [BR:obr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    102700138
SSDB
Motif
Pfam: RRM_1 RRM_7 NMB0537_N SNAPC2
Other DBs
NCBI-GeneID: 102700138
NCBI-ProteinID: XP_040379041
LinkDB
Position
4:complement(19229815..19235569)
AA seq 513 aa
MAPKKRKADPAESAATASENAAANHHQEPPSSELKPRGTIYFPITDDPPEPSAEGGAEGE
DGAGGDDDEEDIAKLLEPLSREQLVALLRTAAETSPATMAAVRRAAEADPASRKLFVHGL
GWGAGADDLRSAFSRFGELEDCRVISDKQSGRSKGYGFVLFRSRRSALRALRRPQLQIGG
RLAFCHLAASGPAPPTSQTQNPSSNTNANSGASNNSGAASSSQPDNMQRKIFVGNVHADV
DVDRLYEYFSQFGEIEEGPLGFDKTTGKPKGFALFVYKSVESARRALEEPMRNFDGKMLN
VQKAIDGRTKNTPGTNANSNPSATAASAAAAAAQLTAPAPAAITYDPSAYGATAVPDLGF
AQQAAMLGMGAQQQAFAQPNAAMLAMMAAAMQNPAMLATLNPAFAAAALGAGGQQVHAAG
IPGFGAQAFGSQGFAAGTAAFPNAAGVQAPPGFQGPPGFQSSAGFQVGQAASQTATAAAA
AAAAGAAGYQAGAAGQGQVPGTQIGGAGFQGGF
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggcgccgaagaagcggaaggcggatccggcggagtccgcggccaccgcgtcggagaac
gccgccgccaaccaccaccaggagccgccgtcctcggagctcaagccccgcgggaccatc
tacttccccatcaccgacgaccccccggagccgagcgcggagggcggcgccgaaggggag
gacggtgccggaggggatgacgacgaggaggacatcgcgaagctgctcgagccgctgtcg
cgggagcagctcgtggcgctgctccgcacggccgcggagacgagccccgcgacgatggcg
gccgtgcggcgcgcggcggaggccgaccccgcgagccggaagctcttcgtccacgggctc
ggctggggcgcgggagccgacgacctccgctccgcgttctcccgcttcggtgaactcgag
gactgccgcgtcatctccgacaagcaatctggcagatccaagggctacggctttgtcctc
ttccgctcccgccgctctgcgctccgcgccctccgccgcccccagctccaaatcggcggc
cggcttgctttctgccatctcgctgcctcgggtcccgcccctccgacctcccagacccag
aaccctagctccaacaccaacgccaactccggtgcttccaataactctggtgccgcatct
tcgtcgcaacctgacaacatgcaacgcaaaatatttgttggtaacgtgcatgctgatgtt
gatgttgaccgcctctacgagtacttctcgcaatttggtgagattgaagagggaccattg
ggatttgacaagaccaccggcaagcctaaggggtttgcgctgttcgtctacaagtctgtg
gagagtgcccgccgtgcgctagaggagccgatgaggaactttgatggcaagatgctcaat
gtgcagaaggctatagatggcaggacgaagaatacacctgggacgaatgcaaattctaac
cctagtgctaccgctgcctctgcagctgcagcggctgcacagttgactgctcctgctcct
gctgccattacgtatgatccatcagcttatggtgctactgctgttcctgacttgggtttt
gcacagcaagctgctatgttggggatgggtgcacagcagcaggcgtttgcacagcccaac
gctgcaatgcttgccatgatggcagcagctatgcaaaacccagctatgctcgcaacgctg
aaccctgcttttgctgctgctgcattgggtgctggggggcagcaggtgcacgctgctggc
attccaggttttggagctcaggcttttggttcacagggctttgcggcaggtactgccgct
tttccaaatgcagcgggtgttcaagctcctccaggttttcagggtccacccgggttccag
agttcagctgggtttcaggttggccaggcagcttcccaaacagctactgctgccgccgcc
gccgccgctgccggtgctgctggttatcaggctggtgctgctgggcagggccaagtgcct
ggcacgcagattggtggtgctggatttcagggtggattttga

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