Oryza brachyantha (malo sina): 102700149
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Entry
102700149 CDS
T02995
Name
(RefSeq) tRNA pseudouridine synthase A 1 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
obr03016
]
102700149
Enzymes [BR:
obr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
102700149
Transfer RNA biogenesis [BR:
obr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
102700149
Prokaryotic type
102700149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
102700149
NCBI-ProteinID:
XP_006655154
LinkDB
All DBs
Position
5:6943845..6957157
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AA seq
340 aa
AA seq
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MLLATVRFAPPPPRVATAAAAAAATGGNISLRDGAHCAVPPSEEDGVDMAWAETAEGAYK
WRMVIAYDGTKFKGWQYQPSPPTIQCCIENALTCITKLDRKELCLIGSGRTDTGVHAWGQ
VAHFTTPFSYHCLDSIHSAINGLLPHEIRVREISAAKPEFHARTSTKSKIYHYKIYNGAV
MDPFHNLYAYHSVYKLNSQAMREAAKHFVGIHDFTSFANAVHNDRVRSPIKKIMRFDVIE
MGAILQLEVEGTGFLYRQVRNMVALLLQVGREALPPDIVPHIIAARDRRELAKVALSAPP
HGLYLMAVNYDKEMLNPPEGAPPISFGRTHQISKCKLLFY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgttagcaaccgtccggttcgctccgcctcctcctcgcgtcgccaccgccgctgcc
gctgccgccgctacagggggaaatatctcgctcagggatggcgcccattgcgcggtgccg
ccatcggaggaggacggcgtcgacatggcgtgggcggagacagcggagggagcgtacaag
tggcgcatggtgatcgcctacgacgggaccaagttcaaaggttggcagtatcaaccatcg
cctccaaccatacaatgttgtattgagaatgcactaacatgcatcactaagctggatcgt
aaggagctctgtttgattggttctggcagaacagacacaggtgttcatgcatggggtcag
gtggcgcatttcaccacacctttttcctaccattgtcttgatagcattcactctgcaatc
aatgggcttctcccacatgagattcgagtgagggaaattagtgcagcaaagcctgaattc
catgcccggacatccacaaagagcaaaatttatcattacaagatttataatggagcagtc
atggacccctttcataatctttatgcttaccatagtgtgtataaacttaattcacaagct
atgcgagaggctgcaaaacattttgttggaatacacgactttacatctttcgccaatgca
gtacacaatgatcgtgtgcgcagtcccataaagaagataatgcgctttgatgttattgaa
atgggtgctatcttacagcttgaggttgaaggcactggctttctgtatagacaagtgagg
aacatggtagctttgttgcttcaagtaggaagggaagcactaccacctgacattgtccca
catatcatcgcagcaagagatcgcagggaactagcaaaggtggcattatcagctccacct
catggattgtacctcatggcggtcaactatgataaggaaatgctaaaccctcctgaaggt
gctcctcccattagctttggaaggactcatcaaattagcaaatgtaaactcttgttttat
tga
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