Oryza brachyantha (malo sina): 102700415
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Entry
102700415 CDS
T02995
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
obr03016
]
102700415
Enzymes [BR:
obr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
102700415
Transfer RNA biogenesis [BR:
obr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
102700415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_25
Methyltransf_12
Maf_flag10_N
RrnaAD
Motif
Other DBs
NCBI-GeneID:
102700415
NCBI-ProteinID:
XP_006650853
UniProt:
J3LUH8
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All DBs
Position
3:28775544..28778663
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AA seq
464 aa
AA seq
DB search
MGRAPASRKPSPPPPPPPPPGRCHFWLPIKRRHCANSPLPASQYCGNHLPDCASDAGAPS
RRRVPCPVDPSHTVLEENLEAHVSKCPLRKHAAALAAQPFYSKGINSGVGEGGGGVTSAA
KRAAVHKLVEDELRALVEKIKSVHAAAAVAMRESYLVTDTCDSWMRNQVDRKVPYQEKHV
KQQASIIGNMEAFGLLRKGGVEEAAEENAAENAPAVVEFGAGRGYLTQMLADCYGIKNVF
LVERRSYKLKADRSLRQNEGITLKRLRIDIEDLNLQGIEALSGCQYLAIGKHLCGLATDM
TMMCCLHERYNQAQYKDHGKNNLCGLALATCCHHLCQWSHYANKTFLQNLGITEENFHAM
TWFSSWAVDGDHSSQDSSLDVEDLSPEDRYEKADKPGVEASGIDKLIRSIPAGERAALGF
MCKDIIDTGRLLWLREKGLDADLVSYVPSNISPENHLLVAKCTS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtgctccggcgagccggaagccctcgccgccgccgcctcctcctccacctccg
ggccgttgccacttctggctcccgatcaagcgccgccactgcgccaattcacccctccca
gcctctcagtactgtgggaaccacctccctgattgcgcctccgatgccggtgcgccctcc
cgccgccgcgtgccttgccccgtcgacccctcgcacaccgtgctcgaggagaacctggag
gcgcacgtcagcaagtgccccctcaggaagcacgccgctgcgcttgcagcgcagccattc
tactccaagggcatcaactctggtgtgggagaaggcggtgggggcgtcacctctgccgcc
aagcgcgccgcggtgcacaagctggttgaggatgaactgcgagccttggttgagaagatc
aagtcggtgcacgcggcggcggcggtggcaatgcgcgagtcataccttgttacagatact
tgcgacagttggatgaggaaccaggttgataggaaggtgccataccaggaaaagcatgtc
aagcagcaggcatccatcattggcaacatggaggcatttggtttgctgcggaagggaggt
gtggaggaggcggcggaggagaatgctgcggaaaatgctccagcagtggtggagtttgga
gcaggcagggggtatttgacacagatgctggcagactgttatgggattaagaatgttttc
ttggttgagagaaggtcatacaagctcaaggctgatcgaagtttgcgacaaaatgaaggc
attactctgaagcgtttgagaattgatattgaagatttgaaccttcaaggaatagaggct
ttgagtgggtgtcagtatctagcaattggaaagcatctatgtggactggcaacagatatg
accatgatgtgctgccttcatgaacggtataaccaggcacaatataaagatcatggcaaa
aataatctatgtggccttgctttggccacctgctgccaccatctctgccaatggagtcac
tatgcaaataaaactttcctccaaaacttagggattacagaggaaaacttccatgccatg
acatggtttagcagctgggctgtggatggtgatcacagttcccaggattcctctttggac
gttgaagacttgtctccagaagataggtatgaaaaagcagataagcctggtgtggaggct
agcgggatcgacaaactcatccgaagtataccagcaggggagagagctgccttggggttt
atgtgtaaagatattatcgataccgggaggctgctatggcttagagagaagggtctagat
gcagatcttgtgagctacgtcccatcaaatatttctccagagaatcacttactcgttgca
aaatgtacgtcctga
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