Oryza brachyantha (malo sina): 102700464
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Entry
102700464 CDS
T02995
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102700464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102700464
03009 Ribosome biogenesis [BR:
obr03009
]
102700464
04131 Membrane trafficking [BR:
obr04131
]
102700464
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obr04147
]
102700464
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
102700464
Ribosome biogenesis [BR:
obr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
102700464
Membrane trafficking [BR:
obr04131
]
SNARE
SNARE associated proteins
Others
102700464
Autophagy
Aggrephagy
Other aggrephagy associated proteins
102700464
Exosome [BR:
obr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102700464
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_2
AAA_16
AAA_33
AAA_5
AAA_22
CDC48_2
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
nSTAND_NTPase5
Parvo_NS1
AAA_18
Vps4_C
ABC_tran
Viral_helicase1
NB-ARC
AAA_7
NACHT
IstB_IS21
TsaE
DUF815
ResIII
Zeta_toxin
AAA_24
AAA_lid_PRS2_C
AstA_C
Zot
Motif
Other DBs
NCBI-GeneID:
102700464
NCBI-ProteinID:
XP_006662392
UniProt:
J3N2Y3
LinkDB
All DBs
Position
10:10540662..10545491
Genome browser
AA seq
808 aa
AA seq
DB search
MASQGEPSSSADPKGKKDYSTAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFR
GDTVLLKGKKRKDTICIVLADETCEEPKIRMNKVVRKNLRVRLGDVVSVHQCQDVKYGKR
VHILPIDDTVEGITGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPTEY
CIVAPDTEIFCDGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIG
VKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAE
KNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKARSHVIVMGATNRPNSID
PALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLELIAKDTHGYVGADLAAL
CTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVVEVPNV
SWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE
CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAG
GAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEQSRH
QIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRNK
DNPEAMEEDEVDEIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF
ERSEAGAGAAADPFASAAAVADDDDLYS
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccaaggggagccctcgtcgtcggccgatccgaaggggaagaaggactactcg
acggcgatcctggagaggaagaagtcgccgaacaggctcgtggttgacgaggccacgaat
gacgacaactccgtcgtcgcgctgcacccggacaccatggagaggctgcagctcttccgc
ggcgacactgtccttctcaagggaaagaagaggaaggatactatttgcattgtccttgct
gacgaaacctgtgaggagcccaagattaggatgaacaaggttgttaggaagaacctgagg
gtgcgacttggtgatgtcgtttctgtccatcagtgccaggatgtgaaatacgggaaacgt
gtgcacatccttccgattgatgacacagttgaaggcattactgggaacctgtttgatgcc
tttttgaagccatacttcctagaagcttaccgccctgtgcgaaagggagatctcttcctt
gttaggggtggaatgagaagtgtggaattcaaagtcatagagactgaccctactgaatat
tgcattgttgcaccggatactgaaattttctgtgatggggagcctgttaagagggaggat
gaggaaaggcttgatgatgttggttatgatgacgttggcggagttagaaagcagatggct
caaatcagagagcttgtcgagcttccattacgtcatcctcaactgttcaaatctattggt
gtgaaaccaccaaagggcattttgctgtatggaccacctggttctggaaagacccttatt
gctcgtgctgtggctaatgagactggagcttttttctttttaattaatggacctgagatc
atgtcaaagctagccggagagagtgagagcaatctcaggaaggcatttgaggaagcagag
aagaatgcaccatctattattttcatagatgagattgattccattgctcccaagagagag
aagaccaatggagaagtcgaacggcgtattgtctcacagctgttgactcttatggatgga
ctcaaagcacgttcccatgttattgttatgggtgctacaaaccgtcctaacagcattgat
cctgctcttcggaggtttggaaggtttgaccgtgagattgacattggcgttcctgatgaa
gttgggcggcttgaggttcttcgtattcacaccaagaacatgaaactagctgaagatgtt
gatttggaactcattgcaaaggatacccatggatatgttggtgctgatcttgctgctctt
tgcactgaggcagctcttcaatgcattcgtgagaagatggatatcatagatcttgaggat
gagacaatagatgctgagatattgaactcgatggctgtcacgaatgaccatttcaagact
gcacttggtacaagcaacccgtctgctcttcgtgaaactgttgttgaagttcctaatgtc
tcttgggaggacattggtgggctggagaatgtcaagagggagctgcaggagactgttcaa
tatccagtggagcacccagagaagtttgagaaatttggaatgtctccctccaaaggagtt
ctcttctatggccctcctggctgtggtaaaacattgttggccaaggcaattgccaatgaa
tgccaggctaacttcatcagtgtgaaggggccagagttgctcaccatgtggtttggagag
agtgaagccaatgttcgtgagatatttgacaaggcacgccagtctgcaccatgtgtgctc
ttctttgatgaacttgactcaattgctactcagagaggaagtagtgtgggcgatgctgga
ggtgcagctgacagagtgctgaatcagctactgacagagatggatggcatgaatgccaag
aagactgttttcattattggggctacaaacaggcctgacatcattgatccagccttgctc
aggccagggcgtcttgatcagctaatttatattccacttcctgacgagcaatctaggcac
caaattttcaaagcttgtctgaggaagtcccctgtggcaaaggatgtggatttgaatgct
cttgccaagtacacccaaggcttcagtggtgcagatattacagaaatctgtcagcgtgca
tgcaaatatgcaattagagagaacatcgagaaggacatcgagagggagaggcggaacaag
gacaacccagaagcaatggaggaggacgaagtcgacgaaattgccgagatcaaggcagct
cacttcgaggagtccatgaagtacgcgcgccgcagtgtcagcgacgccgacatccgcaaa
taccaggcgttcgcccagacgttgcagcagtctcgcggattcggcagcgagttccgcttc
gagcggtcagaggctggcgccggagccgcggctgatccttttgcgtctgccgccgccgtc
gccgatgatgacgatttatatagttag
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