Oryza brachyantha (malo sina): 102700615
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Entry
102700615 CDS
T02995
Name
(RefSeq) protein argonaute 1B isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102700615
03036 Chromosome and associated proteins [BR:
obr03036
]
102700615
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102700615
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102700615
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
102700615
microRNA pathway
RISC loading complex
102700615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
Gly-rich_Ago1
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
102700615
NCBI-ProteinID:
XP_006652649
LinkDB
All DBs
Position
4:complement(16296212..16313541)
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AA seq
1122 aa
AA seq
DB search
MALQLENGRPHHHHQEVPIMVKKKRGSANSGESSGEVPGALGQGSSQRAERAPQHHGGGR
GWVPQQGGRGGGQYQGRGGHYQGRGGQGLHYPGGGPPEYHGRGGPGSHHPGGGPPEYQGR
GGSGSHHPGGGPPEYQPRDYQGRGGSRSRGGMPQPYYGGPRGGGGGRTVPSGPSRTVPEL
HQAPHVQYQAPVVSPTSSGAGSSSHPEAEVSSGQLQQQFQQLAIHGQSSTNQAIQIAPPS
SKSVRFPLRPGKGTYGDRCIVKANHFFAELPDKDLHQYDVSITPEVTSRGVNRAVMFELV
TLYRYSHLGGRLPAYDGRKSLYTAGPLPFASRTFEITLQDEEDSLGGGQSTQRRERLFRV
VIKFAARADLHHLAMFLAGRQADAPQEALQVLDIVLRELPTARYSPVGRSFYSPNLGRRQ
QLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVAQLLNRDISVRPLSDS
DRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELSFPVDDRGTVKTVVQYFLETY
GFSIQHTTLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPQERE
LDILRTVSHNAYHEDQYAQEFGIKIDERLASVEARVLPPPRLKYHDSGREKDVLPRVGQW
NMMNKKMVNGGRVNNWACINFSRNVQDSVARGFCHELAIMCQISGMDFALEPVLPPLTAR
PEHVERALKARYQDAMTMLRPQGRELDLLIVILPDNNGCLYGDLKRICETDLGLVSQCCL
TKHVFKMSKQYLANVALKINVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGE
DSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKVWQDPHRGTVTGGMIKELLI
SFKRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRH
HTRLFANNHNDQRAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLW
DENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMAS
GAATSRGGLPPGVARSARVTGNVSVRPLPALKENVKRVMFYC
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcagctggagaatggccgtccgcatcatcatcatcaggaagtgcccatcatg
gtgaagaagaaaagaggttctgccaactctggtgagagttctggagaggttccaggagct
cttggccagggttcttcacagcgagctgagagagctcctcagcatcatggcggaggacgt
ggttgggtgcctcaacagggtggccgtggtggtgggcaataccagggtcgtggtggacat
tatcagggccgtggagggcaaggtttgcactatccaggcggagggcctcctgagtatcac
ggtcgtggagggccaggttcacatcacccaggtggtgggcctccagagtatcagggacgt
ggaggatctggttcacatcacccaggtggtgggcctcccgagtatcaaccgcgtgactat
cagggacgcggtggttcacgctccagaggtggaatgccacagccatactatggcggacct
aggggagggggcggtggacgtactgttccttcaggtccatcaagaacagttcccgagctg
caccaagccccacatgtccaatatcaagccccggtggtttcaccaacctcatcgggagct
ggctcatcctcacatcctgaggcggaggtgagcagtggacaactccaacaacagtttcag
caacttgcaatccatggtcaaagttcgaccaatcaagccattcaaatagcaccaccatca
agcaaatcagttaggttcccgttgcgccctggcaagggtacatatggggacaggtgcatt
gtgaaggcaaaccatttctttgccgaacttcctgataaagaccttcaccaatacgacgta
tctattactcctgaggttacttcacgtggcgtgaatcgtgctgttatgtttgagctagta
acgctctatagatattcccatctgggtgggcgcctacctgcctatgatggaaggaagagt
ctttacacagctggaccgttgccatttgcttctaggacatttgaaattactcttcaagat
gaggaagatagtcttggtggtggccaaagcacccaaaggcgagagagactatttagggtg
gtgatcaagtttgctgcccgtgctgatctccaccatttggctatgtttctagctggaagg
caagcagatgctcctcaagaagcccttcaagtccttgacattgtgttacgtgaattgcct
accgcaaggtattcaccagttggtcggtcattttattctcccaatttgggaagacgccag
cagcttggtgagggtttggaaagttggcgtggtttttaccaaagcataaggcctacccag
atgggtctctcgctgaatattgatatgtcatccactgcatttatcgagcctctgcctgtg
attgattttgttgctcagcttctgaacagagacatctcagttagaccattatctgattct
gatcgtgtgaagataaagaaagccctaagaggtgtgaaggttgaggtgacacacagagga
aacatgcgaagaaaatatcgtatatctggactcacttcacaggcaacaagagagttatcg
ttccctgttgatgatcgtggtactgtgaagactgttgtgcagtattttctggagacatat
ggttttagtattcagcacaccactttaccttgccttcaagtgggcaatcagcaaagacct
aattatctgccaatggaggtatgtaagatcgttgaggggcagcgttactcgaaacggctt
aacgagaaacagattactgcactactgaaagtgacttgccagcgacctcaagagcgtgaa
ctggatattttgcggactgtgtcccacaatgcataccacgaagatcagtatgcacaggaa
tttggcataaaaattgatgagcgtcttgcatcagttgaagcccgtgttctgcctccccct
aggcttaaatatcatgatagcgggagagagaaggatgtgttgccgagagttggccagtgg
aacatgatgaataagaaaatggtcaatggtgggagagtcaacaactgggcatgtattaac
ttctctagaaatgtgcaagatagtgttgccaggggcttctgtcatgaactggctattatg
tgccaaatatctggaatggattttgcactggaacctgtgctgcccccgcttactgctaga
cctgaacatgtggaacgtgcgctgaaggcacgctatcaagatgctatgaccatgctcaga
ccgcagggcagggaacttgacttgctgattgtaattctgcctgacaataatggttgtctt
tatggggatctcaaaagaatctgtgagactgatcttggattggtctcccaatgttgtttg
accaaacatgtttttaaaatgagcaagcagtatcttgcaaatgttgcccttaaaataaac
gttaaggttgggggaaggaatactgtacttgtggatgctttgacaaggaggattcccctt
gtcagtgacagaccaactattatatttggtgcagatgttactcatcctcatcctggagaa
gattccagtccttcgattgcagctgtggttgcttctcaagactggcctgaagtcactaag
tatgcaggattagtgagtgcccaagcccatcgtcaagaattgatacaggatctgttcaaa
gtatggcaagatccacacagaggaactgttacgggtggcatgatcaaggagcttctcatt
tctttcaagagggctactggacagaaacctcagaggataatattttacagggatggtgtt
agcgaggggcagttctatcaagttttgttgtatgagcttgatgccattagaaaggcatgt
gcgtccctggaacccaattatcagcctcctgttacttttgtggtagtccagaaacggcat
cacacaaggttgttcgctaataatcacaacgatcagcgtgctgttgatagaagtggaaac
attctgcctggaactgttgttgattcaaagatttgtcatccgactgagtttgatttctac
ctgtgtagccatgctggcatacagggaacaagccgacctgctcattaccatgttctgtgg
gatgagaacaaatttactgccgacgagttgcagaccctcacaaacaacttgtgctacact
tatgcaaggtgcactcgctctgtatcgattgtgcctcctgcatactatgctcatctggca
gccttccgggctcgcttttacatggagccagagacatctgacagtggatcgatggcgagt
ggagctgcaacgagccgtggtggccttccaccgggtgttgcgcgcagcgccagggttact
ggaaatgtatccgtgaggcctctacctgctcttaaggaaaacgtgaaacgtgtcatgttt
tactgctaa
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