Oryza brachyantha (malo sina): 102700668
Help
Entry
102700668 CDS
T02995
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obr03009
]
102700668
Enzymes [BR:
obr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102700668
Ribosome biogenesis [BR:
obr03009
]
Eukaryotic type
Pre-60S particles
Helicases
102700668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
102700668
NCBI-ProteinID:
XP_006645526
UniProt:
J3KWN3
LinkDB
All DBs
Position
1:complement(2301591..2304842)
Genome browser
AA seq
648 aa
AA seq
DB search
MSSSSSLAAAAAAARKRALTEQKFSELSPALSPEVVKALRAGGFRRCTPVQAAAIPLLLS
HKDVAVDAATGSGKTLAFVVPVVDILRRRPSPPKPHEVLGIIISPTRELSSQIYNVAQPF
FATLKGVTSMLLVGGLDIKAELKKLEEEGANILVGTPGKLFDVMERLDTLNYKNLEILIL
DEADRLLDLGFQKQITSIISKLPKLRRTGLFSATQTEAVKELAKAGLRNPVRVEVKTEAK
PTSKDGAQQELGPSKTPLGLRLEYMICEASKKSSQLVDFLVQNNGKKIMVYFATCACVDY
WAVVLPLLDSLKGSPIIPYHGKMKQGPREKALSSFSALSSGILVCTDVAARGLDIPHVDL
IVQYDPPQDPNVFIHRAGRTARYDQEGDAIVFLLPKEDTYVEFLKRRGVPLTERECSTNA
ADIVPQIRSAALGDRNVMEKGLTAFVSFVRAYKEHHCSYIFRWKDLEIGNLAMEYGLLQI
PSMPEVKHHSLSLEGFTPVDDVDVTKIKYKDKAREKQRQKTLKRKAEELAQKPETEKRKR
KAPEKPEKPKRKKTGKQRQAVQTKEDIDELGHEYRLLKKLKRGVIDEDEYEKLTGFGDSN
DGDSSDGGDPDLDERKERGNKVLKKVKQKGNAKGSRKFVGSKQKSRRR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcgtcctcgttggcggcggcggccgcggccgcgcggaagcgcgcgctgacg
gagcagaagttctcggagctgtcacccgcgctgtccccggaggtggtgaaggccctgagg
gccggcgggttccggcggtgcacgccggtgcaggcggcggcaatcccgctgctgctgtcg
cacaaggacgtggccgtcgacgccgccaccggctctggcaagacgctcgcgttcgtcgtc
cccgtcgtcgatatcctccgccgccgcccctcgcctcccaagccccacgaggttcttggc
atcatcatctcccccacgagagagctgtcctctcagatatacaatgtggcgcagccattc
ttcgcgacgctgaagggggtgacatccatgctgctggttggtggattggacatcaaggca
gagctgaagaaactggaagaagagggtgcaaacatactggttggcaccccggggaagctg
ttcgatgtcatggaacgcttggacactctcaactacaagaatcttgagattttgatcctg
gatgaagctgataggctgttggatttaggattccaaaagcagattacatctattatttca
aagttgcctaagctgaggagaacggggcttttttcggctactcagacagaggctgttaag
gagctggcaaaagcagggttgaggaaccctgtgagggttgaagttaagacagaggcgaaa
cccacaagtaaagatggtgctcagcaagagcttggtccatccaaaacaccgctagggctt
cggttagagtatatgatatgtgaagcatcaaagaagtcatcacaacttgttgattttctt
gtgcagaacaatggaaagaaaataatggtatactttgcaacatgtgcttgtgtagattac
tgggctgttgttctcccattgctggactcactcaaaggttctccgataattccttaccat
gggaagatgaagcagggccctcgtgagaaagcattgtcatctttttcggccctctcaagt
ggtattctagtttgcaccgatgttgcagcaaggggtcttgacataccacacgttgatctg
attgtgcagtatgatccacctcaagatcccaatgtgttcatacatagagcaggtcgtact
gcacgttatgatcaagaaggggatgctattgtatttctcttaccaaaggaagatacttat
gttgagttcttgaagcgtcgaggtgtacctctcactgaaagggagtgttccacaaatgct
gcagatattgtaccacagatcagaagtgctgcattgggagaccgaaatgtcatggaaaaa
gggcttacagctttcgtttcgtttgttcgggcatacaaggagcaccattgttcttacatt
ttcaggtggaaagaccttgagattggaaatttggctatggagtacggcttactccaaatt
ccatctatgccagaagtgaagcaccattctctttcattggaagggttcactcctgttgat
gatgtcgacgtcactaaaatcaagtacaaggataaagctcgagaaaaacaacggcagaag
acactgaagaggaaagcagaagaactagctcaaaagccagagacagagaagaggaagagg
aaagctccagagaagcctgaaaaacccaaacggaagaagacaggtaagcagcgtcaagcc
gtccaaaccaaggaggacatagacgagctcggacatgagtaccggctcctgaagaagctg
aagcggggggtgatcgacgaagacgagtacgagaagctcaccggattcggggactccaac
gatggagattcctcggatggcggcgatcctgacctggacgagaggaaggagaggggcaac
aaggttttgaagaaagtcaagcagaaagggaatgcaaaagggtccaggaaattcgtaggg
agtaaacagaagagcaggagaagatga
DBGET
integrated database retrieval system
