Oryza brachyantha (malo sina): 102700789
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Entry
102700789 CDS
T02995
Name
(RefSeq) chromatin-remodeling ATPase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102700789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obr03036
]
102700789
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
102700789
INO80 complex (yeast)
102700789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
102700789
NCBI-ProteinID:
XP_015690894
UniProt:
J3LNT2
LinkDB
All DBs
Position
3:11513802..11525397
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AA seq
1499 aa
AA seq
DB search
MDPRRPPPRGGANGGGLSYSTLFNLEPLLNFKVPLPEDLDRHRRRSPNGSMSSQGQGSLS
DQYNGISDASHGLNRKRKHHLDGASDDDDTDAYSNQITEEHYRTMLSEHVQKYRRSKFKE
DVFGSDPPQAIVPRKHKNGTARVTKCRSDTRNVATLGGAEATAEYNGMKYINAHGGFNKL
VASLDSSYLDMGDNVSYIIPEGYDKLAPSLNLPVFSDIRVEENFLNSTLDLRTLAAMLST
DQKFETTNRGGLAEPQPQYESLQERVKVQKFALQVTEDPFAIPEGAAGRIRRFIISESGS
LDVHYVKVLEKGDTYEIIERSLPKKQIVRKDPSEIAREDSEKTIKLWHAIAVKGIPRHHR
NFMALLKKRQVDAKRFSDNCQREVKLKVSRSLKLMRGAAIRTRRLARDMLIFWKRVDKEQ
YELRKREEREAAEALKREEELREAKRQQQRLNFLLSQTELYSHFMQNKASESASPDEGSV
PEPDEEDPEEAELKREALRAAQHAVSQQKRMTNAFDSEIGRLHQSSDSGIATDDLSTVEP
NKIDLLHPSTMPEKSSVQTPELFKGALKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTV
QAMAFLAHLAEDKNIWGPFLVVAPASVVNNWAEEVIRFCPDLKILPYWGPERMVLRKNIN
PKRLYRRDASFHILITNYQILVNEEKLLRRVKWQYMVLDEAQAIKSSSSQRWKTLLSFNC
RNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIEGHAEHGGALNEHQLS
RLHAILKPFMLRRVKIDVIAEMTKKKEEIVPCRLSSRQQVFYQAIKNKISLNELLDGSRG
SLNDKKLLSLMNIVMQLRKVCNHPELFERNEGSSYFYFADIPNSLLSPAFGELQDVHYAG
KRNPIMFEIPKLVYEGIISNMEMTLHGCGFPCGSFNRMFNIFSTSYIHQSAFPEAISPKN
AVLSSGAFGFTRLINLSPLETSFLATCSSFHRLVFSAVRWNKKYMDELVDAFLDSESTDL
DSTHNDVTKVRAVARLLLSPTKADSSLLRTKMETGPSDSPYETLVLSHHERLVSNIRLLR
STYAFIPPARAPPINVWCADRNFAYKLTDEMHDPWAKKLFVGFARTSEFNGPREPISPHP
LIQELHTDLPCPEPMLQLPYRIFGSSPPMSNFDPAKMLTDSGKLQTLDTLLRRLRAENHR
VLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRRDMVRDFQNRNDVFVFLLSTRAG
GLGINLTAADTVIFYEIDWNPTQDQQAMDRTHRLGQTKEVTVYRLICKDTIEEKILQRAK
QKNAVQELVMKGKHVQDDHLMRQEDVVSLLIDDTQMSHKLKEISMQAKDRQKKRRSKGIK
VDNEGDLMLEELDDPTTGAAEQDNTSSKKRKSSQKKLSKSQGNDSVDKNVEAEGVGEAED
EDNIAAPRPKRSKRLMKNVNDDKESEPTTDGDNLADPAENDISRDDDDTAEAQDQTPSA
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcggcgccctccgccgcgcgggggcgccaacggcggcgggctctcctactcg
acgctcttcaacctcgagcctttgctgaactttaaggttccgttgccggaggatcttgac
cgccataggcgtcgtagtccaaatgggagtatgagtagccaaggacaagggtccttgtca
gatcagtataacggtattagtgatgcttcccatgggttaaatcgaaagcgcaaacatcat
ctagatggtgctagcgatgatgatgacacagatgcctatagtaaccaaataactgaggag
cactaccgtacaatgctgagtgaacatgttcagaagtacagaaggtctaagtttaaggag
gatgtttttggttctgatcctcctcaggcaatagttccccggaaacacaaaaatggtact
gcgagagttacaaagtgcagaagtgatacaaggaatgttgcaacattgggtggggcagaa
gccacggccgagtataatgggatgaaatatatcaatgcacatggtggtttcaataagctt
gtagcttcactggattcttcctatttagatatgggagataatgtaagttacataatccca
gaaggttacgataagttggcaccatcccttaatctgcctgttttttctgatatacgtgtg
gaggaaaatttcttgaatagcacactagatttacgaactttagcggcaatgctcagtacg
gaccaaaaatttgagacaaccaatcgtggtggattagccgagcctcagccacaatacgag
tcactccaggaaagggtaaaggtgcagaagtttgctcttcaagtaactgaggaccccttc
gcaattccagaaggagcagctgggaggatacggaggtttattatttcggaatctggcagt
ttggatgttcactatgttaaggtcttggaaaaaggagacacatatgagattattgagcgt
agtttgccaaagaagcaaatagtaagaaaggatccttctgaaattgcaagagaagattca
gaaaaaactattaaactttggcatgctattgctgttaaaggcattccaaggcatcacagg
aatttcatggctttactgaagaaacgtcaagtagatgccaaacgcttctctgacaattgc
caacgagaggtaaagctcaaagtaagcaggtcactgaaactgatgaggggtgctgccata
cgtacacggaggctggctagggatatgttgatattttggaagcgagtagacaaggagcag
tatgaattgaggaaaagagaagaaagggaggcagctgaagctttgaagcgtgaagaggag
ctacgtgaagcaaaaagacagcaacagaggctcaattttctcctatcccaaactgagctt
tatagccactttatgcaaaataaggctagtgaatcagcatcaccagatgagggatctgtc
cctgagccagatgaagaagatcctgaggaagctgaattaaagagagaggccttgagagct
gcacaacatgctgtctcccaacagaaaaggatgacaaatgcgtttgacagtgaaattggc
aggctccatcaatcatctgactctggtattgcaacagatgatttatctactgtggaacct
aacaagatcgatctattacacccctcaacaatgcctgagaagtcgtctgtgcagacacca
gagttatttaaaggtgcactaaaagaatatcagctaaaaggtttacagtggctggttaat
tgttatgagcagggactaaatggtattcttgctgatgagatgggtcttggcaaaaccgtc
caggctatggcattcttagcccatttggctgaggacaaaaacatatggggtccctttcta
gttgttgctcctgcatctgttgtgaataattgggctgaagaggtgatcagattttgccct
gatctaaagatacttccctattggggacctgaaaggatggttcttcggaagaacatcaac
cccaaacgcctttatcgaagagatgctagtttccacattcttattacaaattatcagata
cttgtgaatgaagagaagcttttgcggcgtgttaagtggcaatacatggttttggatgag
gctcaggctattaaaagttcaagcagccagcggtggaagacgttactgagttttaactgt
cgaaatcgcttgcttctcaccggaacacctatacagaacaacatggctgagttatgggcg
cttcttcatttcatcatgcctactttgtttgacagccatgaacagttcaatgagtggttc
tcaaaaggaattgagggtcatgctgaacatggaggtgctttgaatgagcatcagcttagt
cgactgcatgctatactaaagcccttcatgctccgtcgagttaagattgatgtcattgcg
gaaatgaccaaaaagaaagaagagattgtgccttgcagactaagttctcgccagcaagtc
ttttatcaagccataaagaataagatatctcttaacgagttgcttgatggaagtcgtggc
agtctaaatgataagaaattacttagcctgatgaatattgtgatgcagctacgaaaggtc
tgcaatcatccagagttgtttgagcgtaatgaggggagctcttacttttactttgctgac
atcccgaactcacttctttctcctgcgtttggcgaattgcaagatgtgcattatgcaggc
aagaggaatcccataatgtttgagattccgaagttagtctatgaaggaattatctcaaac
atggaaatgactctgcatggttgtggatttccatgcggatctttcaacaggatgtttaat
atattttcaacaagttacatccatcaatcagcttttccagaagctatttcaccaaaaaat
gctgtcctgtcatctggtgcatttggttttacacgtttaataaatttgtccccacttgaa
acttcttttctggccacatgctcgtcattccacagactagtgttctcagcagtgcgatgg
aacaagaaatacatggatgagcttgtggatgcattccttgattcagaaagtactgacctc
gactccactcataatgatgtaacaaaagttcgtgctgttgctcgcttgttgctgtcacct
acaaaagcagattccagtttgctaagaacaaagatggagacaggcccgagtgatagccca
tatgaaacgctagtgctttctcaccatgaaaggcttgtgtcaaacataagacttcttcgt
tcaacatatgcttttattccacctgctagagcaccaccgataaatgtgtggtgtgcagat
cgaaattttgcctacaagttaactgatgagatgcatgatccatgggccaagaaactattt
gtgggatttgctcgtacctctgagttcaatggccctagagaaccaatcagccctcatcct
ctgatacaagaattacatactgatttgccatgccctgagccgatgctacaactaccttat
aggatatttgggtcatctccgcctatgagtaattttgatccagctaaaatgcttacagat
tctgggaagctccaaaccttagatactctactgcggcgcctccgagctgagaatcatcgt
gtgctcctatttgctcagatgactaaaatgctggatattcttgaggactacatgaacttc
agaaaattcaagtatttcagacttgatgggtcttcggcaatttctgatcgacgggacatg
gtccgagacttccagaataggaatgatgtatttgttttcttgctaagcacgagagctggg
ggcttgggtattaatttgactgctgctgatacagttatattttatgaaattgattggaat
ccaacacaggaccagcaagcaatggatagaacacacagacttggtcagacaaaggaggta
actgtgtatagacttatatgcaaagacacaatagaggagaagatattgcaaagagcaaaa
cagaaaaatgcagtgcaagagttggtcatgaaaggaaaacatgtccaggatgatcatctg
atgagacaagaggatgttgtttcattacttattgatgacacacagatgtcacacaaatta
aaagaaatatcaatgcaggcaaaggaccgacaaaaaaagaggcgttcaaagggcatcaag
gttgacaatgaaggagatttgatgcttgaagagttggatgatcctaccacaggggctgca
gaacaagataacacatcaagcaaaaagagaaaaagttcgcaaaagaagctttcaaagtca
cagggtaatgatagtgtggacaagaatgtagaggccgaaggtgttggtgaagcagaggat
gaagacaatattgctgctccaaggcctaaaagatcgaagagactgatgaagaacgttaat
gacgacaaggagtcggaaccaacgactgatggtgacaatctggcagatccagctgagaat
gacatatctcgtgatgacgatgatacggcagaggcacaagatcaaactccttcagcctaa
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integrated database retrieval system
