Oryza brachyantha (malo sina): 102701079
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Entry
102701079 CDS
T02995
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102701079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obr04121
]
102701079
Enzymes [BR:
obr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102701079
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
HECT type E3
102701079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Ribosomal_L10
IQ
Motif
Other DBs
NCBI-GeneID:
102701079
NCBI-ProteinID:
XP_006654075
LinkDB
All DBs
Position
5:2586257..2601280
Genome browser
AA seq
1030 aa
AA seq
DB search
MFFSGDPTARKRVDLGGRSNKERDRQVLLEQTREERRRRLGLRLQNNSATKIQKCFRGRR
DLELARSEVRGNFCSTFGENCQRVDWSSFGANSDFLRQFLFFFNAKKDSDIAMLYQVCNL
LLEYVKHGGDVLKLFGGINYSSVEPLVVHRVKKLALVCAQTVHQKRHDWGSQLLMPSEST
PKLSASLLETVACLINPKLPWNCKVVGYLQRKKIYCLFRGIIVSIPQTARNLEHHNNTSA
LEQVLMLTASHIGHDPCCCPVVDPRWSFSSQLLSIPFLWHRLPHFKKVFSANGLSKYYIH
QIACFLPSCADVLPNDISSNHPGYACVLANVLEAATWILSEPKFASETASDIIAVCTSLL
DSLPTITSPTGRVDDEDDTPMDDVINGLDADLERQITAAIDSRLLQHLVNALFKGTLSTN
YSDPTGPSDVEVEAVGSICAFLHVTFNTLPAERIMTGLAYRTEIVPALWNFIKRCNENQS
WPQFSKFVPSLPADAVGWLLPVSVFCPIYKHMLKIIDNGEFYEQEKPLSLKDLKSLVLIL
KKALWELLWVIPAHASPAKKVLPSPSGLKKLSIENVKIGARIGLSELLAQLQDWNNRLPF
TSSNDFYSQQATSENFVSQALLGNTRASEIIKLAPFLAPFTSRVKIFTSQLVNSRQLTTS
HSALTRHRFKIRRNRLLEDAFDQLSMLSEEDLKGPIRVVFVNEHGVEEAGIDGGGIFKDF
MENITRAAFDVQYGLFKETADHLLYPNPGSGLVHEQHLQYFHFLGSLLGKAIYEGILVDL
PFATFFLSKLKHKYNFLNDLPSLDPELYRHLLSLKHYDGDISQLELYFVIVNNEYGEQSE
EELLPGGRDMRVTNENVITYIHLVANHRLNYQIRAQSTHFLRGFQQLIPNEWINMFNEHE
IQVLISGSLESLDIDDLRSNTNYSGGYHPDHDLIDIFWEVLKNFSSHNQKKFLKFVTGCS
RGPLLGFQYLEPKFCIQRAGIPGMEEEDEDRLPTSATCMNLLKLPPYKNKAQLETKLLYA
INAEAGFDLS
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctccggtgacccgacggcgcggaagcgggtggacctgggagggcggagcaac
aaggagcgggaccgccaggtgctgctcgagcagacgcgcgaggagcggaggcggcgcctg
ggcctgcgcctgcagaacaactcagccacgaagatccagaaatgcttcagagggaggaga
gatttggaattggcacgttcggaagttcgagggaacttttgctctactttcggggagaac
tgccagagggttgattggagcagttttggtgctaattctgatttccttcgtcaattcctg
ttcttcttcaatgcaaagaaagatagcgacattgctatgctctatcaagtctgcaatttg
ctgttagagtatgtcaaacatggtggggatgttctaaaactctttggtggcataaattac
tcctcagtggaacctcttgtggttcacagggttaaaaaacttgcactcgtttgtgcacag
actgtacatcagaagaggcatgattggggcagtcaacttttgatgccgtcagaaagcaca
ccaaagctttctgcttcattactcgaaactgtcgcttgcttgataaatcccaagcttcca
tggaactgcaaggtagttggatatcttcagcggaagaagatctattgcttatttagaggg
attattgtgtccataccgcaaactgcaagaaatttggagcatcataacaatacatctgcc
ctggagcaagttctcatgcttactgcttcacatattggccatgatccgtgttgttgtcca
gtagttgatccaagatggagtttctcctctcagcttctctcaattcctttcctctggcat
cgtttgccacatttcaagaaggttttctcagctaatggactcagcaaatattatatccat
cagatagcttgctttttgcctagctgtgctgatgttcttccaaatgatatatcatctaat
catccaggttatgcatgcgttcttgcaaatgtccttgaagctgcaacctggatcttgtct
gaaccaaagtttgcttctgaaacagcatctgacatcattgctgtctgtacatcactgctg
gactcgttgccaaccatcacatcacctaccggaagggtagatgacgaggatgacacaccc
atggatgatgtcataaatggtcttgatgctgatttggaaagacaaataactgcagcaatt
gattcaaggttgcttcaacatttggtgaatgctttgttcaaaggtacattgagtacaaac
tattctgatccaactggaccatcagatgtcgaggtggaagctgttggatctatatgtgct
tttcttcatgtcacattcaacacattgcctgctgagcggattatgactggactagcatac
cggactgaaatagttcctgcattgtggaacttcataaagcgatgtaatgagaaccaaagt
tggccacaattttccaagttcgtcccttctctgcctgcagatgctgtgggttggctcctg
cctgtatctgtgttctgtcccatatacaagcacatgctgaagataattgataatggggaa
ttctatgaacaagagaaacctttgtcacttaaagatttgaagtccctggttttaattcta
aagaaggctttatgggaactactatgggttattcctgcacatgcctctcctgctaagaaa
gtgctacccagcccttctggacttaagaagttgtcaattgagaatgtcaagattggggca
aggattggtttatccgaactacttgcacagttgcaagattggaacaacaggctcccattc
acttcttctaatgatttctattcgcaacaagcaactagtgaaaattttgtctctcaggct
ctacttggcaatactagagcatcggaaattataaaactggctcccttcttagcacctttt
accagcagagttaaaatattcacttcacaattggtaaattctagacaattgacaacatca
cattctgcgttgacaagacatcgattcaaaataagaagaaatcgacttctggaagacgct
tttgatcagctaagcatgctttctgaagaagaccttaaaggaccgattcgagtggtgttt
gttaatgagcatggtgttgaagaggctgggattgatggaggtggaattttcaaggatttc
atggaaaatatcactcgagctgcttttgatgtgcagtatggtttgttcaaggagacagct
gatcatcttctatacccaaaccctggatctggattggtccatgaacaacatctgcaatat
tttcattttcttggcagtctcctcgggaaggcaatctatgagggcatacttgttgatctg
ccatttgcaacattcttcttgagcaagctaaaacacaagtacaacttcttaaatgatctg
ccttcattggatccagaattgtatcggcatcttctgtctttaaagcattatgatggtgat
atctcacaattggagttgtactttgtcattgtgaataacgaatatggtgaacaatctgaa
gaagaactgctcccaggtgggagagatatgcgtgtaactaatgaaaatgttattacttat
atccatcttgttgccaaccatcggttgaactatcagatccgtgcccaaagcacacatttt
ctgagaggttttcaacaactaataccaaatgaatggattaacatgttcaatgaacatgaa
atccaggttctcatatctggctctctggaaagcttggacattgatgacttacgctcgaac
actaactattccggaggatatcatccggaccatgatcttattgatatattctgggaggtt
ctaaagaacttcagttcacataatcagaaaaagtttctcaagtttgtgactggatgttct
cgtggaccacttcttggattccaatacctcgaaccgaaattctgcattcagagagctgga
atccctggtatggaggaggaggatgaagaccgcttgcctacatcagctacttgcatgaac
cttctgaagctccctccttataagaacaaggcgcaattggaaaccaaattgttgtacgcg
ataaacgcagaagctggtttcgatctaagctaa
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integrated database retrieval system
