Oryza brachyantha (malo sina): 102701176
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Entry
102701176 CDS
T02995
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obr03021
]
102701176
Transcription machinery [BR:
obr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
102701176
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
PP1_inhibitor
GerE
Motif
Other DBs
NCBI-GeneID:
102701176
NCBI-ProteinID:
XP_006655642
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Position
5:19781122..19783758
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AA seq
500 aa
AA seq
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MASTVTTPSRPLSAGCHRRSPRRSAPVVLSLGGGPRRRAPATSCSALASPAKQGSAKLPP
PQPTTSRTTTEADAEQERTDYNEVAAALESIYKLSPAVVEEKDGDADEGDKSKKAKRKRK
GRVGQRNRSATVTVRSRRRRLGQRLDLGKRVEMRRREEEAGAGAGAGKREDEEREFEEML
LREHAVSTDMGSLDWKRMKIPPVLTSSQSARLFRIMQPMKAILEVKENLQNELQRDPTDA
ELAEAMNMPVLQMRRRLEVGRAARNKLIKHNLRLVLYTINKYYPDMANDERFDDICQAGA
NGLITAIDRFEPKRGFRISTYALFWIRHSIVRAMTLSNFTRFPFAMESERQEIHRAREEL
SFELGRAPADEEIMKRVGLSPARYRDVLRMTKPTYSLHARNRVTQEELINEVTDADAIGV
DTSKHNTLLRLAIDDLLDSLKPKESVVIRQRFGLDGRGKRTLSEIAGNLNISREMVRKYE
LKALMKLKHPTRVEYLRRYM
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaccgtgacgacgccgagccgcccgctctcggccgggtgccaccgccgctcg
ccgcggcggtccgcgcccgtcgtgctctccctcggcggcgggccgcggcgccgagcgccg
gccaccagctgctctgccctcgcgtcgcccgcgaagcagggcagtgccaagctcccgccg
ccgcagccgacgacgtcgaggacgaccacggaggccgacgccgagcaggagcggacggac
tacaacgaggtggccgccgcgctggagagcatctacaagctgagccccgccgtggtcgag
gagaaggacggcgacgccgacgagggcgacaagagcaagaaggcgaagcggaagaggaaa
gggagagtgggacagaggaaccggagcgcgacggtgacggtgaggagccggaggaggcgg
ctgggacagaggttggacctgggaaagagagtggagatgaggaggagggaggaagaagcc
ggcgccggcgccggcgccggcaaaagggaagacgaggagcgggagttcgaggagatgctg
ctgagagagcacgcggtgtccaccgacatgggcagcctcgactggaagcggatgaagatc
ccgcccgtgctcacctcctcccagagcgcccgcctcttcaggatcatgcaacccatgaag
gcaatcttggaggtgaaagagaacctgcagaacgaactgcagagagatccaaccgatgca
gagctcgccgaggccatgaacatgccggtgcttcagatgagacgccgcctcgaggtcggc
cgagctgccaggaacaagctcatcaagcataacctgaggctggtgctgtacacgatcaac
aagtactacccggacatggcgaacgacgagaggttcgacgacatctgccaggccggcgcc
aatggcctcatcacggcgatcgaccggttcgagcccaagcgcggcttccgcatctccacc
tacgcgctcttctggatccgccactccatcgtccgcgccatgacgctctccaacttcacc
cgcttccccttcgccatggaatcggagaggcaggagatccacagggcgagggaggagctg
tcgttcgagctcgggcgggcgccggcggacgaggagatcatgaagagggtgggcctgtct
ccggcgaggtaccgcgacgtgctgcggatgacgaagccgacctactccctccacgcgcgg
aacagggtcacccaggaggagctcatcaacgaggtcaccgacgccgacgccatcggcgtc
gacaccagcaagcacaacacgctcctccgcctcgccatcgacgacctcctggattcgctg
aagccgaaggagagcgtggtgatccggcagaggttcgggctggacgggagggggaagcgc
acgctgagcgagatcgccggaaacctcaacatctcgagggagatggtacgcaagtacgag
ctcaaggcgctcatgaagctcaagcatcccacccgagttgaatacctgcgcagatacatg
tga
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