Oryza brachyantha (malo sina): 102701287
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Entry
102701287 CDS
T02995
Name
(RefSeq) RNA polymerase sigma factor sigA
KO
K03086
RNA polymerase primary sigma factor
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obr03021
]
102701287
Transcription machinery [BR:
obr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
102701287
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
VIR_N
Motif
Other DBs
NCBI-GeneID:
102701287
NCBI-ProteinID:
XP_006659164
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Position
8:2655777..2659534
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AA seq
524 aa
AA seq
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MTATPAVIGLSAGNRLLSTSFGPSDLMADKVSLSVGGGGGGGDALPFAPPAPATPKLTVA
AHRLKLSPHGRAQVMRALRHHSSAPALLSPPPPPPPPPLSSSSSSPSRDAADLESSLESI
LLLQRSMLEKQWELPFEDEDHASDDGGGDKHAMAIGLAEDEIKEDKVTVVVARSTLSARQ
RRMSGRRRGRPKNGAAHFAVSPELMQSRNRIYLRGTVSKELLTHKQVVHLSNKIKDGIWL
QQQRSKLKEKLGNEPSYKQLAHSLKISPPELRSRMRESFLAREMLTMSNIRLVISIAQKY
DNLGVELADLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRALAENSKTFRLPT
YLHERLIAIRSAKYALEDQGIAPTIENIAESLNISEKKVHNATGAVNKVLSLDQQAFPSL
NGLPGETLHSYIEDQNVANDPWYGFEEQYLKEEVNKLLNSTLNERERDIIRLYHGIGKQC
HTWEDISRQFGLSRERVRQLGLIAMEKLKHAARRKNMDALLEDY
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgacgccggcggtgatcgggctcagcgcggggaacaggctgctcagcacatcg
ttcggcccgtccgacctgatggcggacaaggtgagcctcagcgtcggaggaggaggggga
ggcggggacgcgctgccgttcgcgccgccggcgcccgcgacgcccaagctcaccgtcgcc
gcgcacaggctcaagctctccccgcacggccgcgcgcaggtcatgcgcgcgctcaggcac
cactcctccgcgccggctctgttgtcaccgccccctcctcctccccctccgccgctttcc
tcctcctcctcctccccctcgcgcgacgccgccgacctcgagtcctccctcgagtccatc
ctgctcctgcagaggtccatgctcgagaagcagtgggagcttcccttcgaggacgaagac
cacgcctccgacgacggcggcggcgacaaacacgccatggccatcggcttggccgaggac
gaaatcaaggaggacaaggtcaccgtcgtcgtggcgcggtccactctctcggcgcggcag
aggaggatgagcggccggaggcgggggaggcccaagaacggcgcggcgcacttcgccgtc
agccccgagctgatgcagagcaggaacaggatctacctcaggggcaccgtcagcaaggag
ctcctcacgcacaagcaggtcgtccacctctccaacaagatcaaggatggcatctggctg
cagcagcaaagatcaaagctgaaagaaaagctggggaatgagccatcatacaagcagctg
gcacattcactgaagatatcacctcctgaactacgttcaaggatgcgcgagtcgtttctc
gcaagggagatgctaacaatgagcaacattcgtttggtcatctccattgcacagaagtat
gataaccttggtgtcgagttggctgacctgattcagggaggtctgatagggttactccgt
gggatcgaaaagtttgatgcatcgaggggctttagaatctccacttatgtatactggtgg
atacgccagggtgtttcaagagcattagctgaaaactcaaaaacattcaggcttccaact
tatctgcatgagcggctaattgctattcgtagtgcaaagtatgcgttggaagatcaagga
attgctccaacaatagaaaacatcgcagagtcgctcaacatatctgaaaagaaagtacac
aatgctacaggggccgtgaacaaggttctatcattggatcaacaggcatttccttccttg
aacggtttacctggagagacactgcacagctacatagaggatcaaaatgtagcaaatgat
ccatggtatggatttgaggagcagtatctcaaggaagaagtcaacaagcttttaaactca
acactcaacgagcgtgagagggacattatccggttatatcacggcataggaaaacagtgc
catacatgggaggatattagcagacagtttggtttgtcgagggagagggtgaggcaacta
ggacttattgcgatggagaagctgaagcacgctgcgaggaggaaaaatatggatgcattg
cttgaggattattga
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integrated database retrieval system
