Oryza brachyantha (malo sina): 102701378
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Entry
102701378 CDS
T02995
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102701378
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
obr01002
]
102701378
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obr03021
]
102701378
03036 Chromosome and associated proteins [BR:
obr03036
]
102701378
Peptidases and inhibitors [BR:
obr01002
]
Metallo peptidases
Family M1
102701378
Transcription machinery [BR:
obr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102701378
Coactivators
SAGA/TFTC/STAGA complex
102701378
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
102701378
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF2_3rd
TPR_TAF2_C
Peptidase_M1
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
102701378
NCBI-ProteinID:
XP_006661218
UniProt:
J3MXC7
LinkDB
All DBs
Position
9:8880715..8898660
Genome browser
AA seq
1451 aa
AA seq
DB search
MAKARKQKGDEQKPDGGGGSAAGGGGGGGATVLHQKLCLSIDMENRLIYGYTEIKIQAEN
DTFALHADNMTIRNILVDGQVAEFEYFPQWKNAGDEQSLSSISCSKTAADAACSVYISSL
NSEAAPNLIISSERSSKLITEPQNEENSGNHEENGEKHGKNSETHDGNGEKCEENGGKPA
QISDDQAVNGCNGSADKKEKEEETEKYNEKEKEQQTETEEEEEKKEKKEKEKVEEEDQEE
KEKEKEKEEENLEENGNEKDKENEIEKVKNTKLVHIDYILEKAETGLHFVGNILHSNNQI
RRAHCWFPCIDNATQRCPFDLEFTVNMNLVAVSNGDLLYQVLSKEDPPRKTYVYKLSTPV
SAQWISLVVGPFEVLPDRNDISVSHMCLSQNLPKLENTISFFHSAYSCYEDYLAASFPFG
LYKQVFLPPEMIVSPTSLGASTCIFNSDILHDEKVIDQIIDTRIKIAFALARQWFGIYTS
AEEQTDEWLLDGLAGFLTEHFVKRYLGNNEARYRRFKANCTVCEFDVGGATALSSPSASS
DLFGTQTIGSYGKIRSLKAVSVLQMLEKQMGPDPFRKILQMIVAPTRGSRTLSTKEFRHL
ANKVGNLERPFLKEFFPRWVESCGCPVMRLGISYSKRRNLVELAVSRGCTAKVTDPGPDS
RMNGDIREGDTGWPGMMSVRVHETDGVYDHPIVPMAGEALQVVEIQCHSKVAAKRFQKTK
KGSKPDGSDDIDASNQENRASMDAPLLWIRVDPEMEYLAEIHFHQPVQMWINQLEKDKDV
ISQSQAIAVMEKSSQLSFAVINALNNFLNDTKAFWRVRVEAAYALAVTASEDTELTGLLH
LVKFYKSRRFDADIGLPRPNDFHDIPEYFVLEAIPHAVALVRSADKSSPKEAIEFILQLL
KYNDNNGNVYSDVYWLSAMVQAIGDLEFGQQGVGLLSSLLKRIDRLLQFDSFMPGYNGVL
TVSCIRTLARIAQRVSPSICLDRICELIAPFRNMDKPWKVRMEASRVLIDLEFHHKGLDA
ALLLFLKYANEERSLRGGTKLAVHALRLCQANIEPQDNNQIQLPTLVGLLCLLAGKKAYN
NVYLRHNVFCILQIAAGRSPTLHGVPKVVSPPQIVQEISSDNHTKADSSVPQQSRPHEHS
TGTPQQSRPQEPSTGTPQQARPPEPSTSTPSVREVLPASGPTKDADNISNCSERRNVVKI
RVKRASSSSKADDADHRDHSHGRNENEAGPCSSMSVDAPMTEAPEAVNVSNHNIEEQNSC
HDRESRMSASISNVKLIDKHEASKELQCTADSRLDAIPKDHLSPIVNGQEAVDKPCSQLE
VVSTSYDGNQAPGSLNGLETKEKKKDKKDKKRNRDKKDDPEYLEKKRLKKEKKRIEKEKG
KRQKEKEGEGVSSSEPKNIAKPSDSHGTSSARPPAPMRTAEPQISNVRAPVDTTRTLTTT
KIRIKVKPLQR
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggcgaggaagcagaagggcgacgagcagaagcccgacggtggcggtggctcc
gcggctggtgggggaggaggcggcggcgccaccgtgctccaccagaagctgtgcctctcc
atcgacatggagaaccggctgatctacgggtacactgagataaaaattcaagctgagaat
gatacttttgccctgcatgctgacaacatgacgattaggaacatattggtagatggtcaa
gttgctgagtttgagtactttcctcaatggaaaaatgctggtgatgaacagagtttgtct
tcaatatcatgttccaagactgctgctgatgctgcgtgctcagtatatatctcttctcta
aatagtgaagctgcacctaatctcataatctcatctgagagatcaagcaagctaataact
gagccacagaatgaagaaaatagtggaaatcatgaagaaaatggtgaaaaacatggaaaa
aacagtgaaacgcatgatggaaatggtgagaaatgtgaagaaaatggtggaaaacctgct
caaatatctgatgatcaagctgttaatggctgcaacggttctgctgataaaaaggaaaaa
gaagaggaaacagaaaagtacaatgaaaaagagaaggagcagcaaacggaaacagaggag
gaggaggagaagaaggagaagaaggagaaggaaaaggtggaggaggaggatcaggaggag
aaggagaaggagaaggagaaggaggaggagaatttagaggaaaatggaaatgagaaggac
aaggaaaatgaaattgaaaaggtgaagaacacaaaactggttcacatagattatattttg
gagaaggctgaaactggacttcacttcgttgggaacatcttacacagtaacaatcaaata
aggcgtgcacactgttggtttccttgcattgataatgcaacacaacgctgtccatttgac
ctagagtttacagttaacatgaatctagttgctgtcagtaatggtgacctactttaccag
gtcttaagcaaggaagatcctccaagaaaaacatatgtgtataaattgagcactccagtt
agtgcacagtggatatctttggtggttggtccatttgaagttcttcctgacaggaatgac
ataagtgtatcacatatgtgcttatctcagaatttaccaaagcttgaaaacaccatctca
tttttccacagtgcgtacagctgttatgaagattatcttgctgcatcatttccttttgga
ctatacaaacaggtttttcttccacctgaaatgatagtatcaccaacaagtttaggagcc
tccacatgcatttttaattcagatatcttacacgatgaaaaggttatagatcagataatt
gacacgagaatcaaaatagcatttgctcttgcaaggcaatggtttggcatatacacaagt
gcagaggagcagactgatgaatggttattggatggtttggctggttttctcaccgagcat
tttgtcaagcgttatcttgggaataatgaagcacgttataggcgtttcaaggccaattgt
actgtatgtgagtttgatgtcggtggtgcaactgctttgagctctccttcagcttcgagt
gatttatttggaactcaaacaattggctcatatggaaaaattcgttctttgaaggcagtg
tctgttcttcaaatgttggagaaacagatggggccagaccctttccgaaagattctgcag
atgatagttgctccaactcgtggctcaagaacactaagtacaaaagagttcaggcatctt
gcaaacaaggtcggtaatcttgaacggccattcctgaaagaatttttcccaaggtgggtt
gaatcttgtgggtgcccagttatgagattgggaatctcctacagcaagaggagaaacttg
gttgaattagctgtttcacggggttgcacagcaaaagtcactgatcctggtcctgatagt
cgcatgaatggtgatattcgagaaggcgatactggttggccaggaatgatgagtgtgcgt
gtccatgaaactgatggagtgtatgatcatccgattgtgcctatggctggtgaagccttg
caggtggtagaaatacaatgtcattccaaagtagcagcaaagcgcttccagaaaactaag
aaaggctcaaagcctgatggttctgatgacatagatgcttcaaatcaagagaaccgtgca
agtatggatgcacctttattgtggatcagagtggacccggagatggagtatctcgctgag
atccattttcaccagcctgtgcagatgtggatcaatcaattggaaaaggacaaagatgtc
atttcacaatcacaagcaatagctgtaatggagaaatcatctcaactttcttttgctgtg
attaatgccctcaataatttcttaaatgatacaaaggcattttggagagttagagttgaa
gcagcatatgcgttagccgtaactgcatcagaggacactgaactaactggactgcttcat
ctggttaagttctataaaagccggcgatttgatgcagatattggattacccaggccgaat
gacttccatgatattccagagtactttgttcttgaggcaattcctcatgcagtagctctt
gttagatcagcagacaagagcagcccaaaagaagccattgagtttatccttcagctttta
aagtataacgataacaacggaaatgtatactctgatgtctactggctatctgcaatggtg
caggcaataggtgacctagaatttggccagcagggtgtaggcctattgtcatctcttctc
aagcgcattgatcggctactgcaatttgacagctttatgcctggttacaatggggttttg
actgtcagctgcattcgcacccttgcacgtattgcacagagggtgtcaccttccatttgc
cttgatcgcatctgtgaactcattgctccctttcgcaacatggacaaaccatggaaagtt
cgcatggaagctagcagggttcttattgacctcgagtttcaccataaaggacttgatgca
gctcttttgttattcttgaaatatgctaatgaagaaagatctttgagaggagggacaaag
ttggccgttcatgccttgcgtctatgccaagcgaatattgaaccgcaggataataatcaa
atacaattgccaactctagttggtctcctttgcttgcttgcaggcaaaaaggcttacaac
aatgtatatcttcgacataatgtgttctgcatattgcaaattgctgctggaaggtctcca
acactgcatggagttcctaaggttgtcagtccacctcaaattgtccaggagatatctagt
gataatcacactaaagctgattcatcagttcctcaacaatcaaggcctcatgaacattca
actggcactcctcaacaatcaaggcctcaagaaccttcaactggcactcctcaacaagca
aggcctccagaaccttcaactagcactccaagtgtccgtgaagtcttacctgcctctgga
cccacaaaggatgcagataatatatctaactgcagtgagagaaggaatgttgtcaaaata
agggttaaacgtgcttcatcatccagtaaagcagatgatgctgatcacagagatcattca
catggtagaaatgaaaatgaagctggtccatgtagctctatgtcagtggatgcccctatg
actgaagcaccagaagcagtaaatgtaagtaatcataatatcgaggaacaaaactcgtgt
catgatagggaatcaaggatgtcagcaagcattagcaatgtcaaactaattgacaagcat
gaagcatccaaggaacttcagtgcacagccgattctaggctagatgctatccccaaggac
cacttatctcctattgttaacggacaggaagccgtagacaagccttgtagtcagcttgag
gtagtctccaccagctatgatggaaatcaagctccaggctccttgaacggactggaaacc
aaagagaagaagaaggacaagaaagataaaaagcggaatcgagataagaaagatgatcct
gagtatctggagaaaaaacggctcaagaaagagaagaaaaggatagagaaagaaaaaggc
aaaaggcagaaggaaaaggaaggtgaaggggtttcatcttccgagccgaagaatatagca
aaaccttcagattctcacggaacttcatcagcgaggccaccagctccaatgcgaactgct
gaaccccagatatcaaatgtgcgggcgccagtagataccacacggacattgaccactacg
aagattaggatcaaagtcaagcctctacaaagataa
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integrated database retrieval system
