Oryza brachyantha (malo sina): 102701405
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Entry
102701405 CDS
T02995
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102701405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obr03041
]
102701405
Spliceosome [BR:
obr03041
]
Common components
Common spliceosomal components
SR proteins
102701405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_YTH1
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
102701405
NCBI-ProteinID:
XP_015688351
LinkDB
All DBs
Position
1:9165994..9172968
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AA seq
258 aa
AA seq
DB search
MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD
AIIGRNGYNFDGYRLRVELAHGGRGQSYSYDRPRSYSSGRRGGVSRRSEYRVMVTGLPSS
ASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTSYEDMKYAIRKLDDSEFRNAFSRAY
IRVREYDDRSRSRSRSYSRSRSYSKSRSPKSVSRSPSPVDERSMSRSQSPVSSPSRGRSV
SRSPSRSLSRSPSPVKSD
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgagcagacgcaacagccgcaccatatatgtaggcaatctccccggggacattcgtgag
agggaggtcgaggatctcttttacaagtatggacgtattttggacattgacttgaagatt
cctccaagacctcctggctatgcttttgttgagtttgaggatcctcgtgatgctgatgat
gcaattattggccgtaatgggtataattttgatggctacaggttgcgggtggaattggct
catggtggaagaggtcaatcttactcatatgatcgcccaagaagctatagcagtggacga
cgtggaggtgtttctaggcgttctgaatatcgcgttatggtcactggtttaccatcatcg
gcatcatggcaggatcttaaggaccacatgcgacgggctggtgatgtctgtttctctgat
gtataccgtgaggctggagcaactgttggaattgtggactatacaagctatgaagacatg
aagtatgcgattaggaagcttgatgactcggagttcagaaatgcattttcacgtgcatat
ataagggtgagagagtatgatgacagatcaagaagcagaagtcgctcttactcaagaagt
cgtagttacagcaagagcaggagtccgaagtctgtttctcggtcaccctcacctgtggat
gaaagatcgatgtcaagatcgcagtcccctgtttcttcaccttctcgtggaagatctgtt
agtagaagcccaagcaggagcttatcccgctctccctctcctgtcaaatctgactga
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