Oryza brachyantha (malo sina): 102701423
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Entry
102701423 CDS
T02995
Name
(RefSeq) guanine nucleotide exchange factor subunit Rich-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obr04131
]
102701423
Membrane trafficking [BR:
obr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
102701423
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
ANAPC4_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
102701423
NCBI-ProteinID:
XP_015689408
UniProt:
J3LHS8
LinkDB
All DBs
Position
2:25422968..25433762
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AA seq
1121 aa
AA seq
DB search
MYMAYGWPQSIPLDPGDSDRVVLLRVLGRFLLAVCPASLHLWSAAHHRARLARLDRSPES
LAAHGENAHAVWSPDAKTVAVLTSSFYLHVYKLQFSGKSLIIGGKPQPGLCLASISLIIV
EKVPLANGVSITSNFVCDSKSMLLGLSNGHLQVISWNAEFSDSFKLGCSACSSNRTPTVR
DALVFDPSSLRENSNTSPAPCCTGNSAIIHVELSVKLRLLVALYSGCHIGLCTIGKKGLK
QTSSIRVERWLNTDDAMCTSVASDQQILAVGCSRGVVELYDLAENARHIRTISLYDWGYS
VEDTGPVTCISWTPDNCAFAVGWKFRGLTVWSVSGCRLMCTIRQTGSNSASSPMVKPSAL
KFEPLMGGTSHIQWDDYGYKLFAVEESLSERVLAFSFAKCCLNRGLSGTTYTRQILYGED
RILLVQPDDTDELKMLHLNVPASYISQNWPVLHVVASHDGMYLAVAGSHGLVLYDLRNKR
WRVFGDVTQEQKIQCKGLLWLGKIVIVCNYMESSNTYELLFFPRYHLDYSSLLYRKPLLG
RPIVMDVLQDHILVTYSPFDVHIFHVAISGELSPASSPVLQLSTVRELSIMSPKSPPVSM
RFIPEPTDDGKLKHDTNGSSDLSQQPSRCLILRMNGELSVLDMDDGHEQALTNSVELFWV
TCSQYEEKGNLIKEVSWLDYGHKGMQVWYPSQGENPFKQEDFLQLDPELEFDREVYPLGL
LPNVGVVVGISQRISFSTAEFPCFEPSPQAQTILHCLLRHLLQRDKHEEALRLANLSAEK
PHFSRCLEWLLFTVFDAEISSQSASKNQLSQKNEPAKKSLLDKTCDLLRNFPEYMDVVVS
VARKTDGRHWADLFHAAGRSTEMFEECFQRRWYRTAACYILVIAKLEGPAVSQYCALRLL
QATLDESLYELAGELVRFLLRSGRDFENATTDSESPRFLSYFLIRSPFKRQSSDLKSNSM
KELSPHIASVMNILENHASYLMSGKELSKLVAFVKGTQFDLVEYLQRERLGSARLENFAS
ALELIGQKLQMDTLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRAEVLVDLFRHDLRLW
KAYSITLQSHDVFREYLDLLNTLEEELSSVADLTLQNGPMS
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcgtatggctggccgcagtcgatcccgctcgatccgggggactccgaccgc
gtggtcctcctccgcgtcctcggccgcttcctcctcgccgtctgccctgcctccctccac
ctctggtccgcggcgcaccacagggcccgcctcgcccgcctcgaccgctcccccgagtcc
ctcgccgcccacggcgagaacgcgcacgccgtgtggagccccgacgcgaagaccgtcgcc
gtcctgacctcttccttctacctgcacgtatacaagctgcagttctcggggaagtcgctg
atcatcggaggcaaaccacaaccggggctttgcctcgcctctatatcgctaataatcgtc
gagaaggttcctctcgccaatggcgtttctataacgagcaatttcgtatgcgacagcaag
agtatgcttcttggactgtccaatgggcacttgcaggttatatcctggaatgctgagttc
tcggacagcttcaagcttggctgctccgcatgttcatccaacagaactcccactgtcaga
gatgctttggtgtttgatccgtctagtttgcgagaaaattctaatacaagtcctgcaccc
tgctgcacagggaattctgccatcatccacgttgagttgtcagtgaagctaaggttgctg
gttgctttgtactcaggctgtcatattggactttgtaccattggtaagaagggattaaaa
caaaccagcagcatcagagtagagagatggttgaacactgatgacgcgatgtgcacttct
gtggcttctgatcagcagattcttgctgttgggtgtagtagaggtgttgttgaattatat
gacctggctgaaaatgcaaggcatatacgcacaatttctttgtatgattgggggtattca
gtggaagatactggtcctgttacttgtatatcttggacgcctgacaattgtgcttttgca
gttggatggaaatttagaggacttactgtgtggtctgtatctggatgtcgtttgatgtgc
acaattcgtcaaactggatcaaattctgcatcatctccaatggttaaacctagtgcttta
aaatttgagcctctaatgggagggacatcacacattcagtgggatgattatggatacaaa
ctatttgcagttgaagaaagcttgtcagaaagggttcttgcattctcatttgccaaatgt
tgcctaaacagaggactttcaggcacaacatatactcgccagattctttatggtgaagat
cgaatcctgttggtgcaaccagatgatactgatgaacttaagatgttgcatcttaatgtt
ccagcatcctatatttcacagaactggccagttctgcatgttgttgccagccatgatggt
atgtacttggcagttgcaggctctcatgggctggtgctgtatgatttgcgcaataaaagg
tggcgtgtttttggggatgttactcaagaacaaaagattcaatgcaaaggcttgttgtgg
cttggcaaaatagttattgtatgcaactacatggaatcatcaaacacgtatgagcttctc
tttttcccaagatatcaccttgattatagctcattactttaccggaaaccacttcttggt
cgaccaattgtcatggatgtcctccaggaccacatacttgttacctacagtccgtttgat
gtgcatatcttccatgtggcgatatcaggcgaattgtcacctgctagtagtccagtttta
cagctttcaacagtccgagaactttcaatcatgagtccaaagagtccacctgtttcaatg
cgtttcattcctgaaccaactgatgatggaaagctgaaacatgatactaatgggtcttct
gacttgtcccaacaaccttcaagatgcctaattttgcggatgaatggggaactatctgta
ttggacatggatgatggacatgaacaagcactcacaaattcagttgaactattttgggtc
acttgttcccaatatgaagagaagggtaatcttatcaaagaggtttcatggcttgactat
ggccataaggggatgcaggtgtggtacccatcacagggagaaaatccttttaaacaagaa
gatttcttgcagctggatccagagcttgagtttgaccgtgaggtgtatcctcttggtctt
cttccaaatgttggtgtagttgttggtatttctcagagaatctccttctcgaccgcagag
tttccatgctttgaaccttcacctcaagcccaaacaatattgcattgtttgttgcggcat
ctccttcagagagacaaacatgaagaagctctgcgtttggcaaacttgtctgcagaaaaa
cctcacttctctcgctgtttagaatggctcctgtttacagtatttgatgcagagatatca
agccaaagtgcttcaaaaaaccagctttcacagaaaaacgaacccgcaaagaagtctctt
ctagacaagacatgtgacctacttcgaaactttccagaatacatggatgttgtggtcagt
gttgctaggaaaactgatggtcggcactgggcagatcttttccatgcagctgggcgatcc
acagagatgtttgaggaatgctttcaacggcgatggtataggactgctgcttgctacatt
ctggtcattgcgaagttggaaggccctgctgtcagtcagtattgtgcactccgtctgcta
caagctacacttgatgaatctctgtacgagcttgctggggagctggttcgcttcttgcta
agatctggcagagactttgaaaatgccactacagactctgaatctccaaggtttctgagc
tactttctaatccgttcaccattcaagagacaatcttccgatttaaaaagtaactcaatg
aaagagctcagcccacatattgcatctgtcatgaatattctggagaaccatgctagctat
ttgatgtctggcaaggagctttctaagcttgttgcttttgtcaaaggaactcagtttgat
cttgtggaatatcttcagcgagaaaggctagggtctgctcgactggagaatttcgcatct
gcacttgaactgattggacaaaagcttcaaatggacactcttcaaagtcggcttgatgct
gagttccttcttgctcacatgtgttctgtcaagtttaaggaatggattgttgtgctagca
actttattgagacgtgctgaggttttggtggacctatttcgacatgatttgagactgtgg
aaagcatatagcatcactttacagtcacatgatgtgttcagagagtaccttgatcttctt
aacactttggaggaggagctttcatctgttgctgatcttacattgcaaaatggaccaatg
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