Oryza brachyantha (malo sina): 102701534
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Entry
102701534 CDS
T02995
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102701534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obr03021
]
102701534
03036 Chromosome and associated proteins [BR:
obr03036
]
102701534
Transcription machinery [BR:
obr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102701534
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102701534
PBAF complex
102701534
GBAF(ncBAF) complex
102701534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
FAS_meander
Motif
Other DBs
NCBI-GeneID:
102701534
NCBI-ProteinID:
XP_006652420
UniProt:
J3LYX8
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All DBs
Position
4:12841548..12846420
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AA seq
554 aa
AA seq
DB search
MSPPGAGAASSGDGSPGRPPRELYTIPASSGWFRWDEIHETERRALPEFFGGAGGSGFGT
ASRNPRIYREYRDYIISKYREDTSRRLTFTEVRKALVGDVTLLRKLFGFLDSSGLINFSA
SPSRPGQQQEAEAVVEAPVGLQVTPRPPASYFAEDKRGGAGENGFRLPPLTSYSDVFGEW
APGMGPICGFCGEVCSDGSVQTLKDGFKVCSKCCANNANKGEANIHPGDSKEHTDNHASS
AWTDAETLLLLEGVLKHGDDWDLIAQHVRTKNKSECIARLIQLPFGEHMLGTVNGKLDGR
LHKSQTTDGKVNKSTVKESSSQPSETVDSMQIDGNENGTDKSIEERPAKPRQLFSSIDTT
VSLMEQLALLTTSTSPDVVAAAADAAIKALGNENPQARRAFLLSEKEYQTRTLSSNHVRR
SDDVVGGQDVEMHTHPDKKQGKMFISTAYQVRAAVATSLGVAVARAKMLADQEEREMELL
MASIIETQLKKIQYKIKHFEELELIMDQEYATIQQIKVSLVDEWLKVLKRAFESGTPIPR
DEVLIKLFQNKPNL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgccgggggccggcgccgcctcctccggcgacgggtcgccgggccgcccgccg
cgggagctctacaccatcccggcctcctcgggttggttccggtgggatgagatccacgag
acggagcggcgggcgctgccggagttcttcggcggcgccggggggagcgggttcgggacg
gcgtcgcggaacccccggatctacagggagtaccgcgactacatcatcagcaagtaccgc
gaggacacctcccgacgcctcaccttcaccgaggtccgcaaggcgctcgtcggcgacgtc
acgctgctccggaagctcttcggcttcctcgactcctcgggcctcatcaacttctccgcc
tccccctctcgtccggggcagcagcaggaggcggaagccgtcgtggaggcgcccgtgggg
ctgcaggtgacgccgcggccgccggcgtcgtacttcgcggaggataagagaggaggggcc
ggggagaacgggttccgattgcctccgctgacctcgtacagtgatgtgtttggagaatgg
gctcccgggatggggcctatatgtgggttctgtggtgaggtgtgcagcgacgggagtgtc
caaacgttgaaggatggctttaaagtatgctcgaagtgttgtgccaataatgctaataag
ggagaagcaaacatacatccaggtgacagtaaggagcatactgacaatcatgcttctagt
gcatggacagatgcagaaactctccttctcttagaaggtgttctaaaacatggagatgac
tgggatctcattgctcagcatgtccgcactaagaataaatcagaatgcattgcaaggctt
attcagttgccttttggtgaacatatgctgggcacagtaaatggtaaattggatggcagg
ctccataaaagccaaacaaccgatggaaaagtgaacaagtccactgtgaaggagtcttca
agtcaaccatctgaaacggttgacagcatgcagattgatggaaatgaaaatggcactgat
aaatctattgaagaacgtcctgcaaaacctagacagttattttcttcaatagataccact
gtctcattaatggagcagctagcgctgcttaccacatcaacaagcccagatgttgttgct
gcggctgctgacgccgcaattaaagcactgggtaatgaaaatccccaagcaaggagagct
tttctactcagtgagaaagagtaccagaccaggacattatcttctaaccacgtccgacgg
agtgatgacgtcgttggtgggcaggacgtggagatgcatacacaccctgataaaaagcag
gggaagatgtttatttctaccgcatatcaagtaagggcagctgttgctacaagtctaggt
gtagctgttgcccgtgctaaaatgcttgcagatcaggaagagcgggaaatggagctccta
atggcatccataattgaaactcagctaaaaaagatccagtacaagatcaaacactttgag
gagctagagttgatcatggatcaagaatatgctactatacagcaaataaaggtctccctc
gtcgatgaatggctaaaggtcctcaagcgagcatttgagagtggaacaccgataccgagg
gatgaagtgcttataaagttgttccaaaacaagccaaatctgtag
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