Oryza brachyantha (malo sina): 102701590
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Entry
102701590 CDS
T02995
Name
(RefSeq) SWI/SNF complex subunit SWI3C isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102701590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obr03021
]
102701590
03036 Chromosome and associated proteins [BR:
obr03036
]
102701590
Transcription machinery [BR:
obr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102701590
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102701590
PBAF complex
102701590
GBAF(ncBAF) complex
102701590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Motif
Other DBs
NCBI-GeneID:
102701590
NCBI-ProteinID:
XP_006663263
UniProt:
J3N6I4
LinkDB
All DBs
Position
11:2988622..2996141
Genome browser
AA seq
789 aa
AA seq
DB search
MPRKASSASDSRLKWRKRKRNSNASPSPSKPSSAAAAEHSDDSDSAVAANEDDDSAVPSA
AGDDAEDETLAGGAGSEDPVLDLRQAEVLPSAEPLSAFPAATRRVVNRPHPSVLAVIAAE
RSACTGDGSAAAAPALENISHGQQQVLSGVLPDNASLATDPDKPSTYVCTPPNLMEGHGV
PKQFQGRLHVVPKHSDWFSPGIVHRLERQVVPHFFTGKSAGNTPEKYMLLRNKVIAKYLE
NPGKRLAFAECQGLVANTSELYDLSRIVRFLDTWGIINYLASGSVHRGLRMATSLLREEP
TGELQLLTAPLKSIDGLILFDRPKCSLQAEDISSLASNSEVVDFDSGLAELDGKIRERLS
ESSCSYCLQPLTSLHYQSQKEADIALCSDCFHDARYIIGHSSLDFQRVDGDKDRSENDGD
SWTDQETLLLLEGIEKHNDNWNDIAEHVGTKSKAQCIYHFIRLPVEDGLLENIKVPDASV
PFRAETNGYPHSDCNGSTLGKLPQRIQPGNHLPFINSSNPVMSLVGFLASAIGPRVAASC
ASAALSVLTRDDDSRLNSESNCSDLRGHGTHPNFRGHNGAISSSISPEKVKHAAMCGLSA
AATKSKLFADQEEREIQRLTATVINHQLKRLELKLKQFAEVETLLLKECEQVERIRQRIA
SDRVRIMSTRLGSPGNSLPGGSSTMSSNPMSISPRPMGVPGSMPQSSMPAAFANNMQGHG
HPQAQMAFLQQQQRQQMLSFGPRLPLSAIQTQPSPQTSNIMFNSGMPNSVTPNHHQLLRS
SSGNNSSVG
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcaaggcctcgtcggcctcagattcgcgcctgaaatggcggaagcggaagcgg
aattccaacgcctccccgtcgccgtcgaagccctcgtccgccgccgcggcggaacactcc
gacgactccgactccgccgtggcggcgaatgaggacgacgactctgccgtcccctccgcc
gcgggggacgacgccgaggacgaaaccctagccggtggtgcggggtcggaggaccccgtg
ctcgacctccggcaggcggaggtgctcccctcggccgagcccctctcggccttccctgcc
gccacccgccgcgtcgtcaaccggccgcacccgtccgtactcgccgtcatcgcggcggag
cgatccgcgtgtacgggtgacggttccgccgcggcggcgccggcactggagaacatttcg
cacgggcagcagcaggtgctctccggggtgcttcccgacaacgcttccctcgccacggac
cctgacaagccgtctacttacgtgtgcacgcctccgaacctgatggaggggcatggcgtg
cccaagcagttccagggtcgcctgcatgtcgtgcccaagcactcagattggttctcccca
gggattgtgcacagactggaaaggcaggtagtgccacacttctttacagggaaatcggcg
ggcaacactccggagaagtacatgctattgaggaataaggttattgcaaagtatttagag
aacccaggcaagagacttgcttttgcggagtgccaggggcttgttgcgaacacgagtgaa
ttatatgatctcagtaggattgttagattcttagacacttggggaatcatcaattacctt
gcgtctgggtcagtgcaccggggtctaaggatggcaacatcccttctaagggaggaacca
accggggagttgcaactgttgactgcgccactgaaatcaattgatggcctaattttgttt
gatcgcccaaagtgtagcctccaagcggaggacatttcttcattggcatcaaattcggag
gtggtggattttgattctggacttgcagaattggatggaaagattagggagcgattgtca
gagagttcttgcagttattgcttacagcctttgaccagtttgcactatcagtcacaaaag
gaggcagatatcgctctatgttctgattgcttccatgatgcaagatatattattggacat
tcaagcttagattttcagagggttgatggggataaagatagatcagaaaatgatggggat
agttggactgatcaagaaacgttattgctgttggagggcatcgagaagcataatgacaat
tggaatgacattgcagaacatgttggaacaaagtcaaaagcacaatgtatttaccatttt
attcgtcttcctgtcgaagatggtctgctagagaatattaaggtgccagatgcatctgtg
ccatttagagcagaaaccaatggatatccacattcagattgcaacggcagcactttagga
aaactacctcaaagaattcaacctggaaaccatcttccattcattaattcttctaatccg
gtgatgtcactggttggatttttggcttctgctataggaccaagagttgcagcatcatgt
gcaagtgctgctttatctgttctgacaagagatgatgattccaggttgaattccgaaagc
aattgctctgatcttaggggccatggtacgcatccaaattttcgtggtcataatggtgct
atatcttcatccatctctccagaaaaggtgaagcatgctgccatgtgtggtctgtcggca
gcagcgacaaagtctaaactttttgcagatcaagaggagcgtgaaatccaaaggctaacg
gctactgtaataaaccatcagttgaaaaggttggaactgaagctgaagcagtttgccgaa
gttgaaaccttgcttttgaaagaatgtgagcaagtggagagaatcaggcagaggatcgca
tctgaccgtgtccgaatcatgtcaacgcggttgggttcacctggaaatagtctacctgga
ggtagtagcaccatgtcatccaatccaatgagtataagccctagaccgatgggcgtgcca
ggctccatgcctcaatccagcatgccagcagcattcgccaataacatgcaggggcatggt
caccctcaggctcagatggcattcttgcagcagcagcagcgacagcagatgctatcattc
ggacctcgcctgccgctgtcggcgatccaaacccagccatccccgcagacgtcaaacatc
atgttcaactctggcatgcccaattcagtaacccctaatcatcatcagctgttgagatcg
tcttctggaaacaattcaagtgtaggatag
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