Oryza brachyantha (malo sina): 102701679
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Entry
102701679 CDS
T02995
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102701679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102701679
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102701679
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
102701679
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
102701679
NCBI-ProteinID:
XP_006663967
UniProt:
J3NCU4
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Position
12:complement(7932338..7939738)
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AA seq
284 aa
AA seq
DB search
MVGLSEGEKHFIRGGIAQDLRADGRRRLQFRAMSVETGVIPQANGSARVRLGSTEVIASV
KAELGKPSILHPDKGKVSIFVDCSPTAAPMFEGRGSEDLSAELSVALQRCLLGGKSGAGA
AIDLSSLIVVDGKVCWDLYIDGLVVSSDGNLLDALAAAIKVALSDTGIPRVNVSLSAATD
EEPEVDVSDDEFLQFDTSSVPVIVTLTKVGKHYIVDATSEEESQMSSAVSVSVNRHRQIC
GLTKRGGAGLDASVIFDMISVAKHVSQQFMSVLDSDIAAAEEAE
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggttggtctttcggaaggggagaagcacttcatccgcggcggcatcgcgcaggacctc
cgcgccgatggccgcaggcggctgcagttccgggctatgtcggtcgagaccggtgtcata
cctcaggcaaacggctccgcgcgtgttagactcgggtcgactgaagtcatagctagcgta
aaggctgagttggggaaaccaagcattcttcatcctgacaaagggaaagtttccattttt
gttgactgtagtccaactgcagcacccatgtttgagggtagaggttctgaagatttatct
gctgagctctctgttgcactgcaaagatgcttacttggtggtaaaagtggggcaggggct
gcaattgatttatcatcactaattgttgttgatggaaaggtctgctgggatctctacatt
gatggacttgttgttagttctgatggaaatttgcttgatgccctggctgctgcaataaag
gtggctttaagtgatacaggtatcccaagagtcaatgtttctcttagtgctgcaacagat
gaggaacctgaggttgatgtcagtgatgatgaatttttgcaattcgacacctccagtgtg
cctgttattgttacattgacgaaggtcggtaagcactacattgtagatgctacctcagag
gaagaatcccagatgagctctgcagtttcggtgtcagttaataggcatcgtcaaatatgt
ggattgaccaagaggggcggtgcaggattggatgcaagcgtcatttttgatatgatatct
gttgccaagcatgtaagtcaacaattcatgtccgtattggattcagatatagccgctgct
gaagaggctgaatag
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