Oryza brachyantha (malo sina): 102701725
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Entry
102701725 CDS
T02995
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like isoform X4
KO
K12890
serine/arginine-rich splicing factor 1
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102701725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obr03041
]
102701725
Spliceosome [BR:
obr03041
]
Common components
Common spliceosomal components
SR proteins
102701725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_YTH1
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
102701725
NCBI-ProteinID:
XP_006654309
UniProt:
J3M6D3
LinkDB
All DBs
Position
5:10898499..10906525
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AA seq
292 aa
AA seq
DB search
MSRRNSCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQD
AIHGRDAYDFDGHRLRVELAHGGRGPSFDRSSNNSSAGRRGASRRTDYRVMVTGLPSSAS
WQDLKDHMRRAGDVCFSDVYREGGATVGIVDYTNYEDMKQAIRKLDDSEFRNAFSRAYVR
VKEYNSTKRSRSCSRSRSHSRSISRSRSRSRSISRSRSRSYSRSRSPRSRSVSRSRSPVK
ERSKSVSRSPSPAKERSPSPATSPQPPREKSASRSPVKSRSLSRSQSPAKSE
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagccggcgcaacagctgcaccatctacgtgggcaatctccccggcgacatccgcgag
agggaggtggaggatctcttctataagtatggccgtattgtggatattgatttgaaaatt
cctccaaggcctcctggttatgcttttgttgagtttgaagacccccgtgatgcgcaggat
gcaattcatggccgtgatgcatatgactttgatggccacaggttgcgggtggagttagct
catggtggcagaggcccttcttttgatcggtcaagcaacaatagcagtgctgggcgccgt
ggtgcctctagacgtactgattaccgtgttatggttactggattaccttcgtcagcatca
tggcaagatctcaaggatcatatgaggcgagctggtgatgtctgtttctctgatgtttat
cgtgagggtggagcaactgttggaattgttgattataccaactatgaggatatgaaacaa
gcaatacgaaagcttgatgactcagagttccgtaatgcattttcacgggcatatgtcagg
gtcaaggagtacaattctactaagcgcagccgctcttgctccagaagccgaagccacagc
cgctctatctcaagaagcagaagccgaagccgctctatctccagaagcagaagccgtagt
tatagcagaagcaggagtccaagatctaggtctgtttctcggtctcgttcaccagtgaaa
gaaagatctaagtctgtttcacggtctccctcacctgcgaaagaaagatccccatcccct
gctacttctcctcagcctccccgcgagaagtctgcaagcaggagccctgtcaagagcaga
agtttatcccgatcccagtctcctgcgaagtctgagtga
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