Oryza brachyantha (malo sina): 102701888
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Entry
102701888 CDS
T02995
Name
(RefSeq) protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obr03021
]
102701888
Transcription machinery [BR:
obr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
102701888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_12
TPR_14
TPR_19
TPR_17
TPR_16
TPR_11
TPR_6
TPR_CcmH_CycH
TPR_7
TPR_9
RPN7
ANAPC3
TPR_10
Fis1_TPR_C
ARM_TT21_5th
DUF1780
Motif
Other DBs
NCBI-GeneID:
102701888
NCBI-ProteinID:
XP_006647244
UniProt:
J3LCI3
LinkDB
All DBs
Position
2:complement(11263771..11281355)
Genome browser
AA seq
1067 aa
AA seq
DB search
MASVYIPVQGTEEEVRVALDQLPADASDILDILKAEQAPLHLWLIIAREYFKQGKIEQFR
QILEEGSGPEIDEYYADVKYERIAILNALGAFHTFLGKVERAHQKEAHFKEATQYYNRAS
RIDETEPSTWIGRGQLCVAKRDLQMASDSFKIVLDDDGSNFPALLGQASVYFLMGDMEQQ
HKKALDYYRNSLDLYKRALRAYTSCPAAVRLGIAFCRYKLGQPDKARQAFQRVLQLDPEN
IDALVALAIMDLQTNEAGGIRRGMDQMRRAFEIYPYCTLALNHLANHYFFTGQHFVVEQL
TETALSSSNHGLLKSHAFYNLARSYHSKGDIETAGRYYMASVNEISKPQDFVLPFFGLGQ
IQLKFADYKSSLASFEKVLEVHPENCESLKAIGHIYAKSGENDKAIETFKKVTRIDPKDH
QAFMELGELLVQSDWAAAMEYLKTARNLLKKAGEKIPIELLNGIGLLHFEKGELEMAEQS
FKEALGDGFCVSIIDGSVGSSVVNWSVQYRDQSFFHQLEEGMPLELPWDKVTTLFNYARL
FEELHDTVKASLFYRLIIFKYPDYIDAYLRLAAIAKEKNNVQLSIELIGDALKIDDKYPN
ALSMLGSLELQGDETWLTAKEHFREAKDASEGKDTYSMLQLGNWNYFAANRPEKKAPKFE
ATHREKAKELYSNVLKQHRGNMFAANGIGILYAEKAQWDIAKELFTQVHEAASGSIFVQM
PDVWINLAHIYFAQGLFQQAVKMYQNCLRKFFYNTDATILLYLARTHYEAEQWQDCRKTL
LRAIHLAPSNYLLRFNVGVSMQKFSASTLQKTKRTVDEVRATVSELQNAIRVFSLLSVAS
TYHSHGFDERKIETHIEYCKHLLDAAKVHRDAAEQAEQQNKQKMEVARQIALADEARRKA
EEQRKAQLERRKQEDELKQVMQQEQHFERVKEQWKTSSNNPGKRKDRSKHEDEEGGSEKR
RRKGGRKRKDQKTKAHYGEEEEDEYRDEPEAEDDYPNTARGNDGDDSEKAPGHLLAAAGL
EDSDAEDDMGHPQSAIERKRRAWSESEDDEPVQRPVQPSAGENDLSD
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgtgtacatcccggtgcaggggacggaggaggaggtgcgggtggccctggac
cagctccccgccgacgcctctgacatcctcgacatcctcaaggccgagcaggccccgcta
cacctctggctcatcatcgcgagagagtacttcaagcaaggaaagatagaacagttccga
cagattctagaggaaggatcaggcccagaaattgatgaatattatgctgatgtgaagtat
gagagaatagctatccttaatgctttgggtgctttccatactttcctggggaaggttgag
agagcacatcagaaggaagcccatttcaaagaagcaactcagtactacaatagggcatca
aggatagatgaaactgaaccttctacatggattggaagaggtcaactctgtgtggccaag
cgcgatttgcaaatggcatctgattcattcaagattgtattggatgacgatggaagcaat
tttccagctttacttggtcaggcctctgtttatttcctgatgggtgacatggagcagcaa
cacaagaaagctctggactattataggaactcactggatctctataagagagccctgcgg
gcctataccagctgtcctgctgctgtgaggcttggtatagcattttgccgatacaaactt
ggtcagccagataaagctcgacaagcttttcaacgtgttctgcagctggaccctgaaaat
attgatgctttagtagcactggcaatcatggacttgcaaacaaatgaagctggtggaatt
cgcagaggaatggaccaaatgagaagagcttttgaaatttatccttattgcactttggca
ctcaaccacctagcaaaccattatttctttactgggcagcattttgtggttgaacaactg
actgagactgctctctcttcaagtaatcatggactgctgaaatcacatgctttctataac
ttagccagatcataccacagtaagggtgatattgagactgctggacggtattatatggct
tctgtcaatgaaatcagtaagccacaggactttgtgttgccattttttggacttggtcag
atacaattaaaatttgcagactacaaaagttcattagctagctttgaaaaagtgttggag
gtgcacccagaaaactgtgaaagtttaaaggctattggacacatatatgcaaagtcgggt
gagaatgacaaagctatagaaaccttcaagaaggttacccggattgatccaaaagatcat
caggcatttatggaattaggtgaattattggtacaatctgattgggctgctgctatggaa
tacttgaaaacagctcggaatctcctaaagaaggcaggagagaaaatacccattgaattg
ctcaatggaattggactgcttcattttgagaagggagaacttgagatggctgaacaaagt
tttaaggaagcactaggagatggcttttgcgtttcaattatagatggcagtgtaggtagc
tctgtggttaactggagtgttcagtatagggaccagagtttttttcaccaacttgaagaa
ggcatgcctcttgaattaccttgggataaggtcactacgttgtttaactatgcaagattg
tttgaagagcttcacgatactgtgaaagccagtctcttttaccgcctcattattttcaag
tacccagactacattgatgcttatcttaggttagcagctattgcaaaagaaaaaaacaat
gttcaactgagcattgagctgataggtgatgctctaaagatagatgataagtatccaaat
gcactttctatgcttggaagtcttgaactccaaggtgacgaaacctggcttactgcaaag
gagcatttccgtgaagctaaagatgcttccgagggaaaagacacatactctatgcttcaa
ctggggaactggaattactttgctgctaaccgccctgagaaaaaggccccaaaatttgag
gccactcatagggagaaagccaaggaactgtattcaaatgtactaaagcagcaccgtggt
aatatgtttgctgcaaatggtattggtatcttatatgctgagaaagcccaatgggatatt
gccaaggagctatttacacaggtacatgaagctgcatcaggaagtatatttgttcagatg
cctgatgtttggataaatttggctcacatatattttgctcaaggtttatttcaacaagct
gtgaaaatgtaccaaaattgcctgcggaagttcttctacaacactgatgcgactatactt
ttgtatcttgcccggacacactatgaagctgaacaatggcaagattgcaggaaaacttta
ctgagagctattcatttggctccatcaaattatttattgcggttcaatgtaggtgtttcg
atgcagaaattctccgcttctactctacagaagacaaaaagaacagttgatgaagttcgt
gcaacagtctctgagcttcagaatgctattagagtattcagtctattgtctgtggcatct
acataccattcccatggttttgatgagagaaaaatagaaactcatattgagtactgcaaa
catttgcttgatgctgctaaggttcatcgcgatgctgctgagcaggctgagcagcaaaat
aagcaaaaaatggaagttgcccgacaaattgctttggctgatgaagctcgccgcaaggct
gaagaacagaggaaagcccagttagaaagaaggaagcaagaggacgagctaaagcaagta
atgcaacaggagcaacacttcgagcgtgtcaaggagcaatggaaaacctcaagcaataac
cctggcaagagaaaagataggtctaagcatgaagatgaagaggggggaagtgaaaagagg
aggaggaagggtggcaggaaaaggaaggatcagaagacaaaggcacactatggggaagag
gaagaagatgaatacagagatgaaccggaagcagaagatgattacccaaatacagcaagg
ggtaatgatggtgacgattcagagaaagccccaggtcaccttcttgctgctgcaggtctt
gaagattctgatgctgaagatgacatgggacatcctcaatctgctatagagcggaagaga
cgagcatggtcagaatctgaggatgatgagccagtgcagaggccagtgcagcctagcgca
ggtgagaacgatttgagtgactga
DBGET
integrated database retrieval system
