Oryza brachyantha (malo sina): 102702287
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Entry
102702287 CDS
T02995
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03018
RNA degradation
obr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102702287
09123 Folding, sorting and degradation
03018 RNA degradation
102702287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102702287
03041 Spliceosome [BR:
obr03041
]
102702287
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102702287
mRNA degradation factors
5'-3' decay
Lsm complex
102702287
Spliceosome [BR:
obr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
102702287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
102702287
NCBI-ProteinID:
XP_006654882
UniProt:
J3MAD5
LinkDB
All DBs
Position
5:20071365..20073427
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AA seq
99 aa
AA seq
DB search
MASGGPGLESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTKEGVQQLVL
GLYIIRGDNISVVGEVDEELDARLDLSKLRAHPLKPVIH
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggcgggccggggctcgaatcgctcgtcgaccagatcatatccgtcatcaca
aacgatggccgcaacattgtgggcacgctcaggggattcgatcaagccaccaacatcatc
ctcgatgagtcccatgagagggtctactctaccaaggagggagtgcaacagcttgttctt
gggctgtacattataaggggcgacaacatcagcgtggtgggggaggtggatgaagagctg
gatgcgaggctggacctgtcgaagctgagagcgcatccgctgaagcctgtgatccactga
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