Oryza brachyantha (malo sina): 102702442
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Entry
102702442 CDS
T02995
Name
(RefSeq) chaperone protein ClpD1, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
obr03110
]
102702442
Chaperones and folding catalysts [BR:
obr03110
]
Heat shock proteins
HSP100
102702442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA_5
AAA
Clp_N
AAA_22
Sigma54_activat
AAA_16
nSTAND3
NBD_SMAX1
IstB_IS21
AAA_18
AAA_7
AAA_14
NACHT
ATPase_2
AAA_25
Zeta_toxin
Torsin
YkoP
Ribosomal_S11
Motif
Other DBs
NCBI-GeneID:
102702442
NCBI-ProteinID:
XP_006647324
LinkDB
All DBs
Position
2:14495200..14500146
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AA seq
937 aa
AA seq
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MEVCCCSTSSAVAVLGAGDLAGRRFAAAGVAARWGAVGIGRAVVLAHPLRPVLRAASQAA
PRRARRAVVRAVFERFTERAVKAVVLSQREAKGLGEGAVAPRHLLLGLVAEDRSTGGFLS
SGINIERAREACRGIGARDLTPGAPSPSGSGLQMDIPFSGSCKRVFEVAVEFSRNMGCSF
ISPEHLALALFTLDDPTTNSLLRSLGADPTQLASVALTRLQGELAKDGREPAGASSFKVT
KKSPAEAGRSAFSKSLNTKKEKGALDQFCLDLTTQASGGFIDPIIGREEEIERVVQIICR
RTKNNPILLGEAGVGKTAIAEGLALRIANGDVPIYLVAKRIMSLDVGLLIAGAKERGELE
SRVTSLIREVREAGDVILFIDEVHNLIGSGTVGKGKGAGLDIGNLLKPPLARGELQCIAA
TTLDEHRMHFEKDKALARRFQPVLVEEPSQDDAVKILLGLREKYETYHKCKFTLEAINAA
VYLSARYIPDRQLPDKAIDLIDEAGSRARMESFNRKKEGQSSILLKSPDEYWQEIRAAQT
MHEVVSSNQMKYSPDQESGSATTEAPDEDKTELVSELQVEEPIIVGTEDIARVASLWSGI
PVQQLTADDRKLLVGLDDELRKRVIGQDDAVMAISRAVKRSRVGLNDPDRPIATLLFCGP
TGVGKTELTKALAASYFGSESAMLRLDMSEYMERHTVSKLIGSPPGYIGYGETGTLTEAV
RRKPFTVVLLDEIEKAHPDIFNILLQIFEDGHLSDSQGRRVSFKNTLIVMTSNVGSTSIS
KGRRSMGFSTEDTESSSYVAMKSLVNEELKAFFRPELLNRIDEMVVFRPLEKTQMLAILD
IILQEVKGRLLALGIGLEVSDAMKDLICHEGYDKSYGARPLRRAVTHLIEDVISEAILFG
EYKPGDTILMDIDAAGKPCLSRLNEKIVQLSDPTRTF
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtgctgctgctcgacgtcgtcggcggtggccgtgctcggggccggggatctc
gctgggaggaggttcgcggccgccggggtggcggcgaggtggggggctgtggggatcggg
agggcggtcgtgctggcgcacccgctgcggccggtcctgcgcgcggcgtcgcaggcggcg
ccgcggcgggcgcggcgcgcggtcgtcagggcggtgttcgagcggttcacggagcgggcg
gtgaaggcggtggtgctgtcgcagcgggaggccaaggggctcggggagggcgccgtggct
ccgcgccacctgctgctggggctcgtcgccgaggacaggtcgacggggggcttcctctcg
tcggggatcaacatcgagcgcgcgcgcgaggcgtgccgcggcatcggcgccagggacctg
acccccggcgcgccatcgccgtccggctcggggctgcaaatggacatacccttctccggg
agctgcaagcgggtgttcgaggtcgccgtggagttctcccggaacatgggctgcagcttc
atctccccggagcacctcgccctcgcgctcttcacgctcgatgatcccaccaccaacagt
cttctcagaagcttgggagcagacccgactcagctagcatcagtagcgctcactcgactc
caaggggagcttgcaaaagatggcagagaacctgcaggagcatcatctttcaaagtgacc
aagaaatctcctgccgaggctggaagatctgcattctccaaatctttaaatacaaagaaa
gaaaagggtgcacttgatcaattctgtctagatttgaccacacaagctagtggtgggttt
attgatcccatcattggccgtgaggaggagattgaaagagtagttcagataatatgccga
cggacaaagaacaatcctattcttttgggtgaggcaggtgttggcaaaactgcaatcgct
gaagggttggctcttcgaattgcaaatggagatgtccccatttaccttgtggcaaagcgt
ataatgtcattggatgttggtctacttatcgctggtgcaaaagaaagaggtgaactggag
tccagggttactagtttaattcgtgaagttcgcgaagcaggggatgttattcttttcatt
gatgaggttcacaatcttattggatctggaactgttggaaagggtaagggtgctggcctt
gacattggcaacttgctgaagcccccacttgctagaggtgaattgcagtgcattgcagct
acaactctagatgaacacaggatgcattttgagaaggataaggctttggctcgccgcttc
cagccagtattagtagaggagccaagtcaggatgatgctgtgaagatattacttggtctt
cgtgaaaaatatgaaacatatcacaaatgcaaatttactttagaagccatcaatgcagca
gtttatctgtcagcaagatatatccctgacaggcagctccctgataaggctattgatctg
atcgatgaagctgggagtagagctcgaatggaatcatttaataggaagaaggaagggcag
tcttctatcctcttaaagtcaccagatgaatactggcaagagataagagctgctcaaacc
atgcatgaagtggtgtcgtcaaaccagatgaagtattctccagatcaagagagtggcagt
gctaccactgaagcaccggacgaggacaagactgagttggtatccgaactccaagttgag
gaaccaatcatagttggaacagaggacattgcaagagttgcctcattatggtcagggata
ccagtccagcagttaactgctgacgatagaaagcttcttgtaggactagatgatgagctc
agaaagcgcgttattggtcaagatgatgctgttatggcaatatctagagcagtgaagaga
tcacgggttggcctcaatgatcctgacagacctattgccactctgcttttctgtggtccg
acaggagttggtaaaactgagcttactaaagctctagcagctagttattttggatcggaa
tctgctatgctcagattagacatgagcgagtatatggagaggcacactgtgagcaagctc
ataggctctcctccagggtacattggatatggtgaaactggtactctgacagaagctgtc
aggagaaagccatttactgtagtattacttgatgagatagagaaagctcaccctgatatt
ttcaacattcttctccaaattttcgaagatgggcatctgtcggactcacagggccgcaga
gtgtcattcaagaacacattgattgtcatgacatcaaatgttggttctacatcaatttca
aagggaagacgaagcatgggtttctcgacagaagatactgaatcaagctcatatgttgca
atgaaatccctggtaaatgaggagttgaaggcatttttccgccctgaattgctcaacaga
atcgatgagatggttgtattccgtcccttagagaaaactcagatgctagctattcttgat
atcatcctacaagaagtgaagggtaggctgttggcccttggaataggcttagaggtgtct
gacgcaatgaaagacctgatttgccatgaaggctatgacaagagctacggtgcgcggccg
ctaaggagagccgtcacccacctgattgaggatgtgatcagcgaggcgattcttttcggt
gaatacaagcccggcgacaccatactgatggatatcgatgctgctgggaaaccttgcttg
agccgcctgaatgagaagatcgtccagctgtctgacccgacacggacattctga
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