Oryza brachyantha (malo sina): 102702748
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Entry
102702748 CDS
T02995
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102702748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102702748
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102702748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Zn_ribbon_RanBP
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
102702748
NCBI-ProteinID:
XP_006652737
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Position
4:complement(17492537..17498308)
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AA seq
680 aa
AA seq
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MPRKVVSGPDYDDEYGDDYDEYDDDYDDYGETGHGDTQLPMKEEKESLKKSSGAVPVLWR
CSMCMFDNHESMVYCEMCGVFRESFIKSSKDGSIKVNRIPSDSGKPLMPKSDSTKVPLKT
RTADFGGDTEIKNAGISHEKAVSSTQSASVGSSSGTGKKVKHIALPEDVPVERTTQLISD
HFQLKEEQSSRAGSSAENEDAAQKLSSDIHKLGLEKNEVDVAKTCLPEEYKPEKWMFADE
ESGVPSQLNLAIVGHVDSGKSTLSGRLLHLLGKISKKDMHKNEKEAKEKGKASFAYAWAM
DESSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACS
GSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAVGYSKERFEFIKVQLGSF
LRSCNFKDSSVIWIPLSAVENQNLINIPSDGHLTSWYQGFCLLEAIDSLQLPSRDVSKPL
ILPICDVIKSQSTGQLAAFGKLETGAIRNGSKVLVSPCGEVATVKTIERDSNSCDIARAG
DNVAVSLLGIEGSKLVPGGVLCNPGFPVLVSNFLELRVLVLDVTIPILVGYQVEFHIHHV
KEAARVTKIVALLDKAGKPSKTAPRFLKSKQNAVVQVTLESPVCVQEFSKCRALGRAFLR
SSGSTIAVGVVMRVLGQDKS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcaaggttgtctctggacctgactacgatgacgagtacggcgatgactacgat
gagtatgatgatgactacgatgattatggcgagaccgggcatggtgacactcagctcccc
atgaaggaggagaaagagtcattgaagaagtcctcaggtgcagtgcctgtgctttggaga
tgctctatgtgcatgtttgataatcacgaaagcatggtgtactgtgagatgtgtggggtt
tttcgagaatcctttataaaatcttccaaggatggttcaatcaaagtcaatagaatacca
agtgattctgggaaacctttgatgccgaaatcagattctaccaaggtgcctctgaagact
cgtactgcagactttggtggtgacactgagataaagaatgctggcatatctcatgaaaaa
gcagttagttccacacagtctgcatctgttggtagctcatcaggcactgggaaaaaggtg
aaacacatcgcacttcctgaagatgtgcctgtcgagaggacaactcaattgatttctgat
cattttcagctgaaggaggaacagagtagtagggctggcagttctgctgagaatgaggat
gcagcccagaaactttcttctgacatccacaagctaggtttagaaaagaatgaagttgat
gttgcaaaaacttgtttacccgaagaatataagcctgagaagtggatgtttgctgatgag
gaatcaggagtgccgagccaactaaaccttgcaatagtgggtcatgttgattctggcaaa
tcaacactctctgggagactgctacatctactaggaaagatatcaaaaaaagatatgcac
aagaatgagaaggaggctaaagaaaaaggaaaagcatcatttgcttatgcatgggctatg
gatgagagcagtgaagaaagagaaagaggtgtgacaatgactgtggctgtggcttattta
gagaccaagaagtaccgtgtagttttgcttgactccccgggccataaagattttgtacca
aatatgatatctggtgcaacacaagctgatgcagctattcttgttgttgatgcttgctct
ggctcgtttgaagctggcatggatggtgaaggagggaaaagtgttggccagacaaaggaa
catgctcagcttattagaagcttcggtgttgaacagcttattgttgcggtcaacaagatg
gatgctgttggatactccaaagaaagatttgagttcatcaaggtccaacttggtagtttt
ctgcggtcatgcaacttcaaagactcatctgttatctggattcctcttagtgctgttgaa
aatcagaatttgatcaatatcccttctgatggccatttaacctcctggtatcaaggattt
tgtctcttggaagctatagattccttgcagcttccatctcgggatgtttcgaagccacta
attcttcctatctgtgatgttatcaagtctcagtcaacagggcagttggcagcatttgga
aaattagagactggagctattcgaaatggttcaaaggttttagtttcaccttgtggggaa
gtggcaacagtgaaaaccatcgaacgcgactcaaactcatgtgacatagcaagagctggt
gataatgtagcagttagtttactgggtattgaggggagtaagctagtaccaggtggggtt
ctttgcaaccctggtttcccagtgcttgtgtcaaacttcttggagctaagggttctagtg
ttggacgtcaccattcctatccttgttggctaccaggtggaatttcacatacatcatgtg
aaggaagctgcaagggttacaaaaatcgtggcattgcttgacaaggctgggaaaccaagc
aaaactgcacctcgatttcttaaatcaaagcagaatgctgttgtgcaggttaccctagag
tctccagtctgtgttcaagaattctccaaatgccgagctcttggcagggcattcttaagg
tcgtctggaagcacaatcgctgttggagtcgtaatgcgggtactcgggcaagataagagc
tga
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