Oryza brachyantha (malo sina): 102702767
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Entry
102702767 CDS
T02995
Name
(RefSeq) LOW QUALITY PROTEIN: putative DEAD-box ATP-dependent RNA helicase 51
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obr03041
]
102702767
03009 Ribosome biogenesis [BR:
obr03009
]
102702767
Enzymes [BR:
obr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102702767
Spliceosome [BR:
obr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102702767
Ribosome biogenesis [BR:
obr03009
]
Eukaryotic type
90S particles
Helicases
102702767
Pre-60S particles
102702767
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CTE_SPB4
AAA_22
Nic96
SLFN-g3_helicase
Helicase_C_2
Pup
Motif
Other DBs
NCBI-GeneID:
102702767
NCBI-ProteinID:
XP_015694202
LinkDB
All DBs
Position
6:13742291..13748440
Genome browser
AA seq
495 aa
AA seq
DB search
MSKKRKRPVAAPPEPVVDASNSNLDGEILQQEDNAAIRSKGKGGGGGILTDKLFSDLPIS
DLTARAIADMNYTHLTQIQARSIPHLMLGSDVMASAKTGSGKTLAFLIPAIELLHKLRFS
PRNGTGVIVLCPTRELAIQTHNVAKELMKYYHSQTVGYVIGGIDLRGEANQLAKGINVLV
ATPGRLLDHMQKNKSFKYGCLKCLIIDEADRILEENFEEHVREIFKRLPRKDRQTVLFSA
TQTKKVEDFAKLTFGEKEERQRKLVYVGVDDHESKATVKGLKQGYCVIPSERRFLVLYSF
LKKTLARKKKVMVFFSSCNSVKFHAQLLNLIQIXCYDIHGQLKQHQRTSTFFKFHKAQHG
ILLCTNVAARGLDIPDVDYIVQYDPPDEPKDYIHRVGRTARGDNGKGSAILFLLPKELQM
LIHLKAANISLSEYAFREELVPKLQTYLENIVCGNYILNQSAKEAYRSYLLSYKSHCMKD
IFDIHRLDLTINDVC
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaagcggaagcgccccgtcgccgctccgccggagccggtagtagacgcctcc
aattccaacctggacggagagatcctgcagcaggaggacaacgccgcgatcaggagcaag
gggaagggtgggggaggtgggattctgacggacaagctcttctcggacctccccatctcc
gacctcaccgccagggccatcgcggacatgaactacacccatctcacccagattcaagct
agatcgataccgcacctgatgctaggaagcgatgtgatggcttcggccaagactggatca
gggaagacgctcgcgttcctcataccggcgatcgagctgctccacaagctgcggttctcg
ccgaggaacggcacaggggttatcgtgctttgcccaacaagggagcttgctatccagacg
cacaatgttgccaaggaattaatgaagtattatcattcacaaactgttggatatgtaatt
ggtggtattgacttgaggggcgaagccaatcagcttgcaaaagggatcaatgtattagtt
gcaacgccaggcagacttctggaccatatgcaaaaaaacaaaagtttcaaatatggatgc
ctaaagtgtcttataattgatgaagctgatcgcatacttgaggaaaattttgaggaacat
gtgagagaaatatttaaacgccttcctcggaaggataggcagactgttcttttttctgct
acacagactaaaaaggttgaagattttgcaaagttaacatttggggaaaaggaagaaaga
caacgaaaacttgtttatgttggagttgatgaccacgaatcaaaggctactgttaaaggc
ttgaagcagggctactgtgtcattcctagcgagagaaggtttcttgttctgtattctttc
ctaaagaagacattggctaggaagaagaaggtcatggtgttcttttcatcatgcaattca
gtcaaattccacgcacagcttcttaatttgatccagatanngtgttatgatatccacggg
caactaaagcagcatcaacgaactagtacattttttaagtttcacaaggcacaacatggc
atcctattatgcactaatgtggcagcacgaggacttgatattccagatgtggactatatt
gtgcaatatgatcctccagatgaaccaaaggattacattcatagagttggtcgtactgcc
cgtggagataatgggaaaggaagcgcgatactgttcttactaccgaaagaactacagatg
ctcattcacctgaaggcggctaatatttctctgtctgagtacgcgtttagagaagagctt
gtgccaaaattgcagacataccttgagaatattgtctgtgggaattacatcctaaaccaa
tcagcgaaagaagcctacagatcctatcttttgtcatacaagtcacactgtatgaaagac
atttttgatatccatcgacttgatctgacgatcaatgacgtgtgttaa
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