Oryza brachyantha (malo sina): 102703183
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Entry
102703183 CDS
T02995
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 30
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102703183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obr03041
]
102703183
03009 Ribosome biogenesis [BR:
obr03009
]
102703183
Enzymes [BR:
obr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102703183
Spliceosome [BR:
obr03041
]
Complex A
U1 snRNP components
U1 related factors
102703183
Complex B
102703183
Ribosome biogenesis [BR:
obr03009
]
Eukaryotic type
Pre-60S particles
Helicases
102703183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
102703183
NCBI-ProteinID:
XP_040377962
LinkDB
All DBs
Position
1:complement(30592402..30596632)
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AA seq
571 aa
AA seq
DB search
MNPYDLRYADPSSYRDRRSDLAGTAVLAPSAPVAANPYAAAYTPAPAPAAPAGGDFSRFG
GRGRGGGGAGGGGWSRGGGGGTGGYRGGGGRGGGGGRDGLDTLSLPKPDFRSLIPFEKNF
YVECPAVQAMSDTDVAQYRRHRDITVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPT
PIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPVVLILAPTRE
LAVQIQEESAKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTN
LRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVEALARQFLQNPY
KVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLSDLMDGSRILIFFQTKKDCDKVTRQ
LRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGLDVKDIKCVINFDFPT
TLEDYIHRIGRTGRAGASGTAFTFFTHSNAKFSRNLVKILREAGQVVNPALESMAKSASS
MGGGNFRSRGRGGFGNRSGSNSIPIRGRRPY
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatacgacctccgctatgctgacccttcctcctaccgtgacaggcgcagcgac
ctagctgggactgctgtgctcgccccgtcggcccccgtggccgccaacccctacgccgcc
gcgtacacgcccgcgccggctcccgcggcccccgctggcggcgacttctcgcgattcggc
gggaggggccgtggcggtggaggcgcgggcggcggtggctggagtagaggtggtggtggt
ggcactggaggttaccgaggtggcggtgggagaggaggcggtggtggaagggacgggctg
gacacgctctctctgccgaaaccggatttccggagcctgatacccttcgagaagaacttc
tacgtcgagtgtcccgccgtgcaggccatgtcggatacggatgtagcccagtatcggcgc
caccgtgatattactgttgagggccatgatgtgcctaagccggttcggtacttccaggag
gccaactttccagattactgcatgcaagcaatagccaagagtggatttgtggagccaaca
cctattcagtctcagggctggccgatggctttgaagggcagggacatgattggtatcgca
caaactggctctgggaaaacactatcttacttactccctggactggttcatgttggcgca
cagcctagactagaacaaggtgatggcccagttgttctgatcctcgctccaacaagagaa
ctggctgtacaaatacaggaagaatctgccaaatttgggtcatactcaagaactagaagc
acttgtatctatggtggagcacctaagggaccacaaatacgagatctaaggagaggggtt
gagatcgtcattgcaacacctggtcggttgatcgatatgctggaagctggtcacactaac
ctacgtagagtaacatacctcgtcctggatgaggcagaccgcatgctagacatgggcttt
gagccccagattcggaaaatagtggcacagatccggccagataggcaaaccttgtactgg
agtgccacttggccaagagaagtagaagcattggctagacagtttctgcaaaatccttac
aaggtaatcataggatcgcctgatcttaaagctaatcattccatacagcaaattattgag
gtcatttcagaacatgaaaagtatcccagactcagtaagcttttgtctgatctaatggac
gggagcagaatcttgatatttttccaaacaaaaaaggactgtgacaaggtcactcgtcaa
cttagaatggatggatggccagcattatctattcatggtgataaagctcaagctgaaagg
gactatgttctggcagagtttaagagtgggaagagtcccataatggctgccactgatgta
gcagcacgtggtcttgatgtcaaggatattaagtgtgtgataaattttgattttccaaca
actcttgaagattacattcacagaataggtcgaactggccgtgctggtgctagtggaact
gcattcacttttttcacacactctaatgcaaaattctctaggaatcttgtcaagattctg
agggaagcaggtcaggttgtgaatccagcactagaatctatggccaagtctgccagttct
atgggaggaggcaatttccggtcgagggggcgcggtgggtttggtaacaggtctggctca
aacagcatcccgataagaggaagacggccatactga
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