Oryza brachyantha (malo sina): 102703196
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Entry
102703196 CDS
T02995
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04120
Ubiquitin mediated proteolysis
obr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102703196
04120 Ubiquitin mediated proteolysis
102703196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obr04121
]
102703196
Enzymes [BR:
obr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102703196
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
U-box type E3
102703196
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
HHA
Motif
Other DBs
NCBI-GeneID:
102703196
NCBI-ProteinID:
XP_006650215
UniProt:
J3LPY9
LinkDB
All DBs
Position
3:14988884..14996831
Genome browser
AA seq
1037 aa
AA seq
DB search
MASPSPPAARPQRTPDEVEDIIMRKILLVSLAPPTAPNPAVAYLELTAAELLSESRPLLA
LRDAAERLLIDRLSLPDPPAGSPSPFAYLVSSFGRAADEARKISTIRDAALRARLAASIA
HVRGLILSYARIVAGNPDTFPSPPNAPHPAAELLVFLLAEAADPLDPTPAPGAPPPPGFV
DEFFGNADYETVEPAMGELYDRLKQSVDKVSALGDFQKPLRVLRRLVGIPNCAKALVNHP
NWIPKNQIMLIGEGRIMEISSVLGAFFHVSAIPDREFASKPDIGQHCFSEASSRRPADLI
SSFTTIKSVMNSLYDGLKDVLLALLKNMDTREKVLEFIAEVINKNAGRSRMQVDPLKSAS
SGMFVNLSAVMLRLCEPFLDKMESKKDKIDVKYLFCNDRVDFKNLTAINASSEEVSSWIE
SRGYEHAEDSASGEARFVESQEATSSGNNSRVSLPSKGGSLVDCSKKENFSFICECFFMT
ARVLNLGLMKALSDFKHIAQDLSRFQDDLESNRAMRDQGGGSAQLDQDIKRLEKIVEILS
QDKLCYEAQIIRDGAFLQRALTFYRLMILWSVDLVGGFKMPLPSQCPKEFACIPEHFLDD
VMDLLVLTSRIPKALESFALDDFLNFIIMFMAGTSYIKNPYLRAKMVEVLNCWMPQRSGL
TSTASLFEGHQLCLDYLVKNLLNLYVDIEFTGSHTQFFDKFNIRHNIAELLEYLWDVPSH
RNAWRQIAKEEEKGIYLNFLNFLINDSIYLLDESLNKILELKEIEAEMANVVQWESRPPQ
EREERLRVFHQWENIVRFDMKLANEDVGMLAFTSEQIPAPFLLPEMVERVASMLNYFLLQ
LAGPQRKSLTVKDPEKYEFKPKQLLKQIATIYVHITRGDKEGIFPAAISKDGRSYNEQLF
ASAANILWKIGGDPQIIQEFMQLASKSKAAASEAMDAEAMLGDIPDEFLDPIQYTLMKDP
VILPSSRVTIDRPVIVRHLLSDSTDPFNRSHLTQDMLIPDTELKSRIEEFIRSQRSKKRS
AADSEMGEPDAAADMVD
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccccgtccccgccggcggcgcggccgcagcggacgcccgacgaggtggaggac
atcatcatgcgcaagatcctcctcgtctccctcgccccgccgaccgcgcccaacccggcc
gtcgcctacctcgagctcaccgccgccgagctcctctccgagtcgcgcccgctcctcgcg
ctgcgcgacgccgccgagcgcctcctcatcgaccgcctctcgctcccggacccgcctgcg
ggctcgccctccccgttcgcctacctggtctcctccttcggccgcgccgccgacgaggcg
cgcaagatctccaccatccgggacgccgcgctccgggcgcgcctcgccgcctccatcgcg
cacgtccgggggctcatcctctcctacgcccgcatcgtcgccgggaaccccgacaccttc
ccctcgccaccaaacgcgccccaccccgctgccgagctgctcgtcttcctcctggccgag
gctgctgacccactcgaccccacccccgcccctggtgctccgccgccgcccggtttcgtc
gacgaattcttcgggaacgcggactatgagaccgtcgagccggccatgggtgagctgtac
gatcgcctgaagcaaagcgtcgacaaggtgtcggcgctcggtgacttccagaagccactg
cgggtgctgaggcggctggtggggatccctaactgcgctaaggctctcgtgaatcacccc
aattggatacccaagaatcaaattatgctcattggggaaggcagaatcatggagatctcc
agtgtgcttggggcgttcttccatgtgagtgcaattcccgatcgtgagtttgcaagcaag
cctgatatcgggcaacattgcttctcagaggcatcttcacgccgaccagctgatttgata
tcatcttttacaacaatcaagagtgttatgaatagcttgtacgatggccttaaggatgtt
cttcttgcccttcttaaaaatatggatactcgagaaaaagttcttgagtttattgctgaa
gtaataaataaaaacgccggcaggtctcgtatgcaggtagaccctttaaagagtgccagc
tcaggtatgtttgtgaatctcagtgctgtgatgctacgcctatgtgagccttttttggat
aagatggagtcaaagaaggataagattgatgtgaagtacctcttctgcaatgatagagtt
gatttcaagaatttgactgcaataaatgcttcttcagaggaagtatcatcttggatagag
agcaggggttatgagcatgctgaagacagtgccagtggagaggctcgctttgttgaatca
caggaagccacaagctctggcaacaacagcagagtttctcttccttctaaaggcggatca
cttgtggattgctcaaagaaagaaaatttctcctttatttgtgaatgcttcttcatgact
gcaagggtgctcaatctagggctgatgaaagctctatcagatttcaaacatattgcgcag
gatctctctagattccaagatgatttggaatcaaacagagcaatgagagatcaaggaggt
ggctccgcacagcttgatcaagatataaaacgcctagagaagattgttgagattttatca
caggacaaactatgctatgaagctcagataataagagatggtgcatttcttcaacgtgca
ctaactttctacagattaatgatattgtggtcagtcgaccttgttggcggatttaagatg
cccttgccatcacagtgtccaaaggaatttgcttgcattccagagcatttccttgatgat
gtaatggatttactagttctaacctctagaattccaaaagctttggaaagctttgcattg
gatgactttctcaatttcatcattatgttcatggcgggcacttcttatattaaaaatcct
tacttaagagcaaagatggttgaagttttgaattgctggatgccacaaagaagtggcttg
acttccacagcctcgttgtttgaggggcaccaactatgtctcgattatctggttaaaaat
cttctaaatctttatgtggatattgaatttactggctcccatacacaattctttgacaag
tttaacattcgacataatattgctgagcttctagagtatctatgggatgtgcccagtcat
cggaatgcatggagacaaatagctaaagaagaggagaagggcatatatttaaattttttg
aacttccttatcaacgatagcatctatctccttgatgagagtttaaacaaaatccttgaa
ctgaaagaaatagaggctgaaatggctaatgttgtgcaatgggaaagcagaccacctcaa
gaaagagaggagaggttgcgtgtatttcatcagtgggagaacattgttcgatttgacatg
aagctagcaaatgaggatgttgggatgcttgctttcacatcagaacagattccagcacct
ttccttcttccagaaatggtggaaagggtggcaagcatgctaaattacttcctcttgcaa
cttgctggtcctcagaggaaatcattgacagtaaaagatcccgagaagtatgaattcaag
ccaaagcagctcttgaaacagattgccaccatatatgtccatatcacaaggggtgataaa
gaaggtatattcccagctgccatctcgaaagatggaagatcatacaatgagcagttgttt
gcaagtgcagcaaatattttgtggaagattgggggagaccctcaaatcatacaggagttt
atgcaacttgctagtaagtcaaaagctgctgcttctgaggccatggatgctgaggctatg
cttggtgacataccagacgaatttcttgatccaattcagtatactctgatgaaggatcct
gtaatacttccgtcgtcgcgggtcacaatagatcgaccagttattgttaggcacttgcta
agtgatagcacggatccattcaaccggtctcacctcacgcaagacatgttgataccagat
acggagctgaagtctcgcatcgaagagttcatcaggtctcaacggtccaaaaaacgaagt
gctgctgattctgaaatgggagaacctgatgcggcagctgatatggttgactaa
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