Oryza brachyantha (malo sina): 102703206
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Entry
102703206 CDS
T02995
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03030
DNA replication
obr03410
Base excision repair
obr03420
Nucleotide excision repair
obr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102703206
03410 Base excision repair
102703206
03420 Nucleotide excision repair
102703206
03430 Mismatch repair
102703206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obr03032
]
102703206
03036 Chromosome and associated proteins [BR:
obr03036
]
102703206
03400 DNA repair and recombination proteins [BR:
obr03400
]
102703206
DNA replication proteins [BR:
obr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102703206
DNA Replication Termination Factors
ELG1-RFC complex
102703206
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102703206
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102703206
Check point factors
HRAD17(Rad24)-RFC complex
102703206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
Mg_chelatase
AAA_16
Rad17
Viral_helicase1
AAA_5
RuvB_N
nSTAND3
AAA_11
AAA_28
RCF1-5-like_lid
AAA_24
AAA_assoc_2
AAA_19
AAA_25
AAA_30
MeaB
RNA_helicase
DNAX_ATPase_lid
AAA_3
ABC_tran
IstB_IS21
SLFN-g3_helicase
bpMoxR
NTPase_1
AAA_18
NPHP3_N
DO-GTPase1
DUF6120
DNA_pol3_gamma3
KTI12
DNA_pol3_delta_C
Motif
Other DBs
NCBI-GeneID:
102703206
NCBI-ProteinID:
XP_006652657
UniProt:
J3M0I3
LinkDB
All DBs
Position
4:16462802..16465980
Genome browser
AA seq
335 aa
AA seq
DB search
MAASSSATAPALAEAYDIPWVEKYRPTRVADVVGNSDAVSRLEVIARDGNMPNLILSGPP
GTGKTTSILALAHELLGPSYREAVLELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKVV
ILDEADSMTSGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEI
LGRLMVVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATVSGFRFVNQENVFKVCDQP
HPLHVKNMVKNVLDGKFDEACSALKQLYDLGYSPTDIITTLFRVIKNYDMAEYLKLELLK
ETGFAHMRICDGVGSFLQLSGLLAKFALVRETAKA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctcctcctccgccaccgcccccgccctcgccgaggcctacgacatcccgtgg
gtggagaagtaccgccccacccgcgtcgcggacgtcgtcggcaactccgacgctgtaagc
cgcctcgaggtcatcgcccgcgacggcaacatgccaaacctaatcctctccggacctccg
ggcacggggaaaactacgagcatcctggcgctggcgcacgaactgctcggacctagctac
cgcgaggccgtgctggagctcaatgcctcggacgacaggggtctggacgtggtgcggaac
aaaatcaagatgtttgcgcagaaaaaggtcacgctgcaaccagggcggcacaaggttgtc
atcttggatgaggccgacagcatgacgtctggagcacagcaagcactaaggagaacaatg
gaaatctattccaacaccacaaggtttgcacttgcgtgcaacacttcgtctaagatcatt
gaacccattcaaagccgttgtgctattgtacgattctcaaggctctctgatcaggaaatt
cttggccgactcatggttgtggtggcagctgagaaggttccttatgtgccagaggggctc
gaagcaatcatctttactgctgatggtgatatgaggcaagctttgaacaacttgcaagct
acagttagtgggtttcgttttgttaatcaagaaaatgtgttcaaggtatgtgatcagcca
catccattgcatgtcaagaatatggtgaaaaatgtcctcgatggaaagtttgatgaggcc
tgctctgctctgaagcaactatatgatttggggtactctcccactgacataatcactact
ctcttccgggttatcaagaactacgacatggctgaatatctaaaactggaactgctgaag
gaaactggatttgctcacatgagaatctgtgatggtgttgggtcattccttcagctatca
ggccttctcgcaaaatttgcgttggtgagagaaacagcaaaagcatga
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