Oryza brachyantha (malo sina): 102703287
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Entry
102703287 CDS
T02995
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102703287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102703287
03036 Chromosome and associated proteins [BR:
obr03036
]
102703287
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102703287
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102703287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
102703287
NCBI-ProteinID:
XP_006649480
UniProt:
J3LKH5
LinkDB
All DBs
Position
3:3229381..3234006
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AA seq
1003 aa
AA seq
DB search
MSSAPVFPVLRHDDYFTRPSIDELVEMEAADPGYCSRVPGFVVGRVGYGQLSFPGDTDVR
GMDLNEIVKFGKHCVEVYKDEDSKPPLGQGLNKAAEVTLMLDLSEIPEPGTLVEVLKRQT
RKQGAWFVSFNHLSGRWKFEVDHFSRFGLVDEEEEDVVMDEVVARQPIAEVREPPANGHE
LELSRSLPAHLGLDPAKMQEMRMTMFSNEDGDEDMEDGFPSDQRYFSSERMNVDSPNSSA
LRLRSLSPLHGSSLKVGRKFGVLDRKEPQALLEYSANSSELGLSSHGILMSGQNKGFPVR
MTKVDGFKLPANQTTPVTGKIYTNCVVDAALFMGKSFRVGWGPNGILVHSGSLVNRPGTG
LSSVIHVEKVVCDKVVRDEKNKVKEELTDLCFSEPMDLHRKLDREYLETESDLFKLKLQK
VVTSRFVLPDICRSYIDIIERQLEVSDLSLSSRVLLMHQVTVWELIRVLFSERATGTQLE
PTGDEDQEGMILDKKEGSVAIDLEALPLVRRADFSNWLQDSVCHRVQGEAGSLNDARYLE
HIILLLTGRQLDTAMEIAASRGDVRLAILLSQAGGSMLNRSDLAQQLDLWKANGLDFNYI
EDDRVKIYELLSGNVQGALVDLSIDWKRYLGLIMWYQLSPDTSLDIIIHSYHQLLGEGKV
PYPVPVYIDEGPLDESLQWSPGDRFDISFYLMLLHANQDEKFGMLKTMFSAFSSSYDPLD
YHMIWHQRSILEAIGAFSSDDLHVLDLSFVYQLLCLGKCHWAIYIILHMPHLDDAPYIHE
KLIREILSQYCESWSKDETQRDYIAELGVPAEWMHEALALYNEYYGDQQSALENYIRCGN
WKKAHTIFMTSIAHSLFLSSKHQEIWDITSALEDHKSEIADWELGAGIYIDFFILRSSMQ
EESTVDDSDLLEKKNESCSTFFSRLNDSLLIWGSKLPVEARACFSKMAEELCELLMNTPG
EGLAPNLYMGCFQTMLNAPVPDDHRSSYLQEAVSVFTDILCRD
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgccccggtgttccccgtgctccgccacgacgattacttcaccaggccgtca
atcgatgagctggtggagatggaggcggctgaccctggctactgcagcagggtcccgggc
ttcgtcgtcgggagggtagggtatgggcagcttagcttccccggcgacaccgatgtgagg
gggatggacctgaatgagatcgttaagtttggcaagcactgtgtggaggtttacaaggat
gaggatagcaagcctcctctagggcaaggtcttaacaaggcagcagaagtgacgttgatg
ctggatttgagtgaaatcccagagcctggcactcttgttgaggtgctgaaacgtcaaacg
agaaagcagggtgcttggtttgtttcgttcaaccacttgagtggcaggtggaagtttgag
gtcgatcattttagtcgatttggtcttgtggatgaggaggaagaggatgttgtgatggat
gaggtggtagctcggcagcctattgccgaagtaagagaaccacctgcaaatggtcatgaa
ctggagctttcgcgttcgttgcctgctcatcttgggcttgaccctgcaaagatgcaagaa
atgcggatgacaatgttctccaatgaggatggtgacgaagatatggaggatggattccca
tctgatcagagatattttagcagtgaaaggatgaatgtggattcacccaactcaagtgct
ttgaggctgaggtcgctctctcctttgcatggttcttctctgaaggtcggtaggaaattt
ggtgttcttgataggaaagaaccacaagcactgctggaatacagtgcaaattcttcagaa
cttggcctatcttctcatggtattcttatgtctgggcaaaacaagggatttccagtgaga
atgaccaaggtggatggctttaagttgccagctaatcaaacaacgcctgttactgggaaa
atatacactaactgtgttgttgatgctgctttatttatgggtaagtcatttcgtgttggt
tggggaccaaatggcatccttgttcattctggtagtcttgtcaacagacctggaaccggt
ctatcttctgtgattcacgtagagaaagttgtgtgtgacaaagttgtgcgtgatgagaag
aacaaagttaaggaggaactgacagatctatgcttctcagaaccgatggatctccatagg
aagcttgatcgggaatatctggagactgagtctgacttgtttaaattaaagcttcagaag
gttgtgacaagtcgttttgtgctgccagatatttgcaggtcttatattgacatcattgaa
aggcagctcgaagtcagtgatttatctctgtcttcgcgtgttctgttaatgcatcaggtt
acagtttgggagctaattcgggtcttgttctcagaaagagcaactggcacccagttagaa
cctactggcgatgaggaccaggaggggatgattttagataagaaagaaggttctgttgcg
atagaccttgaagcgctccctttggttagaagagcagacttcagcaattggttacaggac
agtgtttgtcatcgggttcaaggagaggcaggttccttaaatgatgccaggtatttggaa
catattattctgcttttgaccggtcgccaattagacacggccatggaaattgctgcttca
aggggtgatgttcgattggcaattttgctaagccaggcaggtgggtcaatgctaaatcga
tctgaccttgctcagcaactggatctatggaaagcaaatggtctagattttaattatatt
gaggacgacagggtaaagatatatgagttgctttccggtaatgtacaaggtgccttggtg
gatttatcaattgactggaaacggtaccttggactaataatgtggtaccaactatcgcct
gatacatcacttgatattatcattcactcttatcaccagctccttggtgagggcaaagtc
ccatatcctgttcctgtatatatagacgaaggacctcttgatgagtcacttcagtggtcc
ccaggtgaccgctttgacatatctttttatctaatgcttcttcatgcaaatcaagatgag
aagtttgggatgctgaaaactatgttcagtgcattctcatcttcatatgatcccttggac
taccatatgatctggcatcagcgttccattctggaagctattggtgctttcagttcagat
gatcttcacgtgctagatttgagttttgtttaccaactattgtgtctggggaagtgccat
tgggctatctatatcattctacatatgcctcatcttgatgacgccccatacatccatgag
aagttgatcagggaaattttgtcacaatattgtgaatcatggagcaaggatgaaactcag
cgagattatattgcagaacttggcgttccagcagaatggatgcatgaggctctggctctt
tacaacgaatactatggagatcagcaaagcgcactggagaattatatccggtgtggcaac
tggaagaaagctcatacaatttttatgacatccattgctcattctttgtttctatcatct
aaacatcaagagatctgggacatcacaagtgctttggaggatcacaagtctgaaattgct
gattgggaacttggtgctggaatatacatagacttcttcattctaaggagctccatgcaa
gaagaaagtactgtggatgattcggatctgcttgagaagaaaaatgaatcatgcagcact
ttctttagccggttaaatgattcattgctaatatggggaagtaaattacctgttgaggca
agggcatgcttctcgaagatggcagaggagctatgcgagctattaatgaacactcccggc
gagggcttggcgccaaatctctacatgggctgctttcaaacgatgctcaacgctcctgtg
cccgatgaccacaggtcatcttacctgcaagaagcggtctctgttttcaccgacatactt
tgcagggattga
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integrated database retrieval system
