Oryza brachyantha (malo sina): 102703783
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Entry
102703783 CDS
T02995
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obr03021
]
102703783
Transcription machinery [BR:
obr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
102703783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
102703783
NCBI-ProteinID:
XP_006655580
UniProt:
J3M9M1
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All DBs
Position
5:18535009..18550845
Genome browser
AA seq
1903 aa
AA seq
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MWTNIFKLGELQNVSWFQFLPIEPDLSTASERSSKAEQKDALNNIVLSAHLHLQSEGFLS
TWTNSFVGPWDPSQGEHNPDEKIKLWLFLPGRHSSVPEMAQHAVAKLRVVSNGLWVAPGN
SEEVAAGLCQALRNSLERTLRGLSYARFGDVFTKYYPPTRNQNSFRRAQPTIEFVFAATE
EAIFVHVVISARYMRNLCSDDIEKVLTHSPRSVGEGLPVIVAPSGMLGKLVGCCPSDLVR
QVYSSKLSAATLPGFTQPTICQLRGQSYYVEIALGFPAATTDKVPESENNQIIKELDTVK
DAQLSADEHQKLESADSVPVLERTFIYPPEAIMVPMVHQAFVRFSSKRMCSQGCMGNSSW
EGWPFWNFSPSSYFLNSSCLGSSRGLGVNSNFLRLRRQKNNNYTSTASSISSVSSTSNGS
EHAVAAEGGDLSADADSMACHQSDLPSNIAGSKMVSKRPRSEITEVSSRAGKESVDNNQG
ANGQGRCSWGWDEEGVVMDINLLISEFGDFSDFFQEEELDFGEPPGTAESHSLVIPGSDC
GDATFTDSPSTAMDIPEQRLSPVGLSSLEVFNHQTMAPIHDVVSKVQEPQKDIASPTGSQ
SVVLSSGRSSYLTKAEALLTYAPEYAAVEISVGEAPTSLFTNPYQPKSIKPGSSSFNSRV
YSYDAAQSSQMESGEDKAEKFVRLTSGNLSRDIGSSNLYTVVQVGKKESDKGLKNNEIQS
GKEEASRPISGETSLNSSLVSQRKSDSMFNAGYFLLSMKTALATEIECIRFQAAMCRIRH
TLLSLRSKASTELKSAFSSLMHTDVNSKLDLVPKYDIKRKENIPARLSIDVDHEVYDRSQ
IENVGVWRSVGTPKGATPLESFSAKTYTGPSQGLSAKRQPIVDLLSAMALIVQQSTSFVD
VALDMDDGDGSFFWLSLDEQKRRGFSCDPSMVHAGCGGILGTCHSKDCAGVDLVDPLSAE
VSESSVISLLQSDIKTALKTAFASMDGPLLVTDWCRGRSNAAESASIGDAYSFQHPTGDI
RESSSSISIGGDSMSPPLSSHVMSNDRGTLELEHHRGYHRVRPTVAVLPLPSLLVGYQDD
WLKTSANCLSLWEKAPLEPYASPKPVTYYALCPDIDMLTSAATDFFLQLGTIYEICKLGT
HSPQNSGGQMELSPGKYLSSGLVLIECPDQVKIGNSHSSSISSTSEYLQALSKSWTVKSF
VTSLTRVIKDIKLNSNILANQKESTSGPCTVIYVVCPFPEPSAVLETLVECSVALGSVML
SPERERKSFLYSQVTKALNCNASVDESSASNVVMLSGFSIPKIVLQIVPIGTLLRLQKPN
NELAVLKDMAFTVYNKARRIPKAMTTSDMFQSPAYMGRSQSTMMHATSPGPTLWKECLVP
RMSRETEFDASMRSSVTWDNSWPGRAGGFMDPNKIPDVCVQDDRKYAFEPLFILAEPGSV
DYSTGMESSKSNVDTSGSGIYSSISGGGSDSGVEGSDNDNAASLHCCYGWTEDWRWLVCI
WTDSKGELLDSLIFPFGGISSRQDTKVFQSLFIQILQQGCQIMSSAPECSNTRPRDVIIT
RIGGFLELEIQEWQKAIYSFGGNEVKKWPVQLRRSIPEGIPSNSNGPALQQQDMGLMQDR
NMPSSPSPLYSPHAKSSFMKGGALGQSGNKKQILVEQAGMDSSKGSLHLVRSISLVAVSQ
DHSLHLTCQADLLARPTPGEGNQSSSGPSSYLEGFTPVKSIGSMSASYLLVPSPSMRYLS
PATLQLPTCLTSESPPLAHLLHSKGTAIPLAMGYVVSKAVPPVRKDSARLAKEERPSVLS
VSIIDHYGGSIAAVQEKMSRGSGKQTRSFTQESAGRDHEMEMHHVLETVAAELHSLSWMT
VSPVYMERRSALPFHCDMVLRLRRLLHYADRHLSQSAEKGDVA
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atgtggacaaacattttcaagcttggggagctccaaaatgtatcatggtttcagtttctt
cctattgaaccagatctaagtacagcttccgagagaagttcaaaagctgagcagaaagat
gctcttaacaacattgtgctgtcggcacatcttcacttacaaagtgaaggtttcctaagt
acttggacaaattcctttgttggtccatgggatccatcgcaaggagagcataaccctgat
gagaagatcaagctctggttgtttcttcctggccgtcactcgtctgtacctgaaatggct
caacatgctgtagccaaattaagagttgtttcaaatggtttatgggtagccccaggcaac
tcggaagaggttgcagctggactctgtcaggcactaagaaattctttagaaagaacacta
cggggactttcctatgcaagattcggtgacgtctttacaaaatactaccctcctacaaga
aatcagaacagctttaggcgagcacagcctacaatcgaatttgtctttgctgctaccgag
gaagcgatctttgtgcatgtggtaatatctgcaaggtacatgaggaatctttgcagtgat
gatatcgagaaagttctcactcattctcctcgctctgttggcgaaggtcttccagtaata
gttgctcctagtggaatgctgggtaagcttgttggctgttgtccgagtgatcttgtgaga
caagtatattcgagcaaactatcggcagccactttacctggttttactcaacctaccatc
tgccagttgagagggcaaagctactatgttgaaatcgcccttggttttccagctgccaca
accgacaaagttcctgaatcagaaaataatcaaataataaaagaattagatacagtgaag
gatgctcagttaagtgctgatgaacatcaaaagctagaatctgctgatagtgttccagtt
cttgaaaggacattcatatacccacccgaggctattatggtacccatggtccatcaggca
ttcgttcgcttttctagtaaaagaatgtgttcacagggctgtatgggaaattcatcatgg
gagggatggccattctggaacttttctccatcttcttactttctgaacagctcttgcctt
ggatcttctcgtggacttggagtgaattctaattttctaagattaaggagacagaagaac
aacaattacactagcacagctagtagtatcagtagcgttagtagcacttccaatggaagt
gaacatgcagttgctgctgaaggtggtgatctttcagctgatgcagactctatggcatgc
catcagtctgatctgccatccaacattgctggtagcaagatggtatccaagcggcctcgt
tctgaaataacagaagtttcttcccgtgctggtaaagaatccgtggataacaatcaaggg
gcaaatggtcaaggtagatgttcttggggctgggatgaggaaggggttgtgatggacatc
aatttactaatatcagagtttggagattttagtgacttctttcaagaagaggagttagac
tttggtgagcctccaggtactgctgaatcacattctctggtgatccctggttctgactgt
ggggatgcgacattcacagatagtccatctacagctatggatatacccgaacaaagactt
tctccagttggtctctcatctttggaggtatttaaccaccaaactatggcacctattcat
gatgttgtttctaaggttcaagaacctcagaaagatattgcatcgcctacaggctcccaa
tcagtagtgttatcatctggtagatctagttatcttaccaaagctgaggcattgctcact
tatgcacctgagtatgcagctgttgaaatttccgttggtgaggcaccaacttctctgttt
acaaatccttaccaacccaaatccatcaaaccagggagttctagttttaactcgagagtt
tattcatatgatgctgcacaaagttctcaaatggagtctggagaagacaaggctgagaag
ttcgttagactaacatctggtaatctttcacgggatattggttcatcaaacttatacaca
gttgtccaagttgggaaaaaagaaagtgacaaaggattaaaaaataatgaaatacaatca
ggcaaggaggaagcatcaagacccatttctggcgagacttcactaaattcttctctggtt
tctcaaaggaagagtgacagcatgtttaatgctgggtacttcctactgtctatgaagact
gcacttgcaactgaaattgaatgtatcaggttccaggctgccatgtgtagaataaggcat
acactattgtctttgagaagcaaagcatctactgagttaaaaagtgccttttccagtctt
atgcatacagatgtcaacagcaagttagatcttgtccccaaatatgacattaaaaggaaa
gaaaatataccagctaggctatctattgatgttgatcatgaagtatatgacagatcccaa
atagaaaatgttggagtttggaggtccgtggggacacctaaaggagcaacacctcttgag
tctttttctgctaaaacatatactggtccaagccaaggtctgtctgcaaaaagacagcct
attgtggatcttctcagtgccatggctttgatagttcaacaatctacttcatttgttgat
gttgcacttgatatggatgatggagatggttcttttttctggctttccttggatgagcaa
aagagacgtggattctcttgtgatccttcaatggttcatgctgggtgtggcggaatatta
ggaacgtgccattctaaggactgcgctggcgttgatttggttgacccactttctgcagag
gtttcagagtcatccgtgattagcttgttacagtctgatataaaaacggctcttaaaact
gcctttgccagcatggatggtccattattagtgactgattggtgcaggggtcgaagtaat
gccgccgagtctgcatctattggagatgcatactcttttcagcacccaactggtgatatc
cgcgagtcttcaagcagtatatccataggtggagattcaatgagcccacctctgtcgagc
catgttatgtctaatgaccgaggcactttggagctggagcaccataggggataccaccgt
gttagaccaactgtggctgtcctccctttgccttctctgcttgtcggttaccaggatgat
tggttaaagacctctgctaattgtcttagcttgtgggagaaggctcctctggaaccttat
gcttcaccgaagcctgttacttattatgccctatgccctgatattgatatgcttacttct
gcggccacagattttttccttcagcttggaacaatttatgaaatttgcaaactgggcact
cattctccacaaaacagtggaggtcaaatggaactatcccctggaaaatatttgtcttca
gggctcgttctcatcgagtgtcctgatcaagtgaagattggaaacagtcactcaagttcc
atcagttcaacaagcgaatatcttcaagctctttcaaaaagttggaccgtgaaaagcttt
gtaacatctctgacaagggtgataaaggatataaaactaaattcaaacatcttggcaaat
cagaaagaaagcactagtggaccttgcactgtaatttatgtagtctgtccatttcctgaa
ccttctgctgtcctagagacactggtagaatgttctgttgctcttgggtcggtgatgtta
tcaccagaaagagaaaggaaatcattcctatattcgcaggttaccaaagccctgaactgc
aatgcttctgttgatgaatcatcagcatccaatgttgtgatgctctcaggtttcagtata
cctaagattgtcttgcagattgttcccattggaactttattgagactccaaaagccaaac
aatgaacttgctgttttaaaggacatggcattcactgtgtacaacaaggctcgccgaatc
ccaaaggccatgaccacgagtgacatgtttcagtcacctgcttatatgggtaggtctcag
tccacaatgatgcatgctacatctcctggtcctaccctttggaaagaatgtttagttcct
cgaatgtctagagaaacagagtttgatgcatccatgaggtcatcagtaacatgggacaac
tcatggcctggccgtgctggaggattcatggacccaaataagatcccagatgtatgtgtt
caagatgacaggaagtatgcgtttgagccacttttcatactagcagagcctggatctgtt
gattacagtactggaatggaatcttcaaaatccaatgtagacactagtggcagtggaatt
tacagctcaatttcaggtggtggctctgatagtggagtcgaaggatctgacaatgacaat
gctgcaagtcttcattgctgctatggttggaccgaggactggcgatggctagtttgcatc
tggacagattctaagggagagttgttggacagcttaatatttccttttggtggtattagt
agccgccaggacacgaaagttttccaaagcctgttcatccaaattctgcagcaaggctgc
caaataatgtcatctgcacctgagtgtagcaatacaagaccaagagatgtaataataacc
cgtattggaggtttccttgaacttgaaatccaggaatggcaaaaagcaatatactcattt
ggtggcaatgaagttaagaagtggccagtgcagttacggcgatctatacctgagggtatc
ccatcaaattctaatggaccagccctccagcaacaagatatgggcttaatgcaagataga
aatatgccgtcctcaccaagccctttgtacagccctcatgcaaaatctagcttcatgaaa
ggtggtgcccttggtcaatcaggcaacaaaaagcagatcctagtggaacaagctggaatg
gacagttcaaagggttcattgcacttggttcgcagcatcagtttggttgcagtttcccaa
gatcattcgttgcatctcacatgccaagcggatctgttggccagacctactcctggtgaa
gggaatcaaagtagcagtggtccttcaagttacttggaagggttcactccagtcaagtcc
attgggtcaatgtcagcctcgtatctcctagtcccttcaccaagcatgcggtacctttcg
ccagcgacattacagcttccaacatgccttacctcagaatcgccacctcttgcgcaccta
ctgcacagcaaagggacagcaattcccctagcaatgggctatgtagtctccaaagctgtc
ccgccggtgagaaaggactccgcccgtcttgccaaagaggagagaccctctgtactctca
gttagcatcattgatcactatggaggcagcattgctgctgttcaagaaaagatgagtcga
ggttctggcaagcaaactaggagcttcacccaggagtcagcaggtcgtgatcatgagatg
gagatgcaccatgtgctggaaactgtggccgccgagctccactccctctcatggatgaca
gtgagcccggtgtacatggaaagacgaagcgccctgcctttccactgtgatatggtccta
cggttgaggagacttctgcattatgctgatcggcatctctcccaatcagcagagaaagga
gatgtagcttag
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